Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2534 |
Symbol | |
ID | 3968729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3205923 |
End bp | 3206546 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921627 |
Product | Holliday junction DNA helicase subunit RuvA |
Protein accession | YP_528006 |
Protein GI | 90022179 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.416621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.292409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGTC GATTAACAGG AATCTTGGCG GAAAAAAAAG CGCCGCATTT ACTTATAGAT ATTGGCGGTG TTGGGTATGA CGTGATTGCG CCTATGACGA CATTTTATCG CCTCCCCGCA CTGGGCGAAA AAGCCGTATT ACACACTCAT TTTTCAGTTA GCGAAACATC GCAGCAATTG TTTGGCTTTA GTAGCCAGCA AGACAGAGAG CTGTTCCGTA TGTTGATTAA GGTGAATGGG GTAGGCCCTA AGCTTGCAGT GGGCATTATG TCCATGGAGT CATCTGATTT TGCTAAATGT GTACTCGATG GCAACTTAAC CGCACTTGTA AAGCTACCTG GCGTAGGCAA AAAAACTGCA GAGCGCTTGT TGGTCGATAT GCGCGATCGA GTTAAGGCCT TAGATACCAC ACCTAGCGAG CATTCGCCTA CAGGGGAGGG GGCAGGTATT GTCCGTGTCG ATCCTGTAAT AAACACCAAT GTAATTATAG CGGACGCTGA AAGCGCGTTA ATTGGCCTAG GGTACAAGCC TACTGAAGCT GCCAAAGCGG TATCTGCTGC GTATAACGAT ACTATTACCA CAAGCGAAGA CCTTATCCGT GCAGCTTTAA AAGGTATGAT TTAA
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Protein sequence | MIGRLTGILA EKKAPHLLID IGGVGYDVIA PMTTFYRLPA LGEKAVLHTH FSVSETSQQL FGFSSQQDRE LFRMLIKVNG VGPKLAVGIM SMESSDFAKC VLDGNLTALV KLPGVGKKTA ERLLVDMRDR VKALDTTPSE HSPTGEGAGI VRVDPVINTN VIIADAESAL IGLGYKPTEA AKAVSAAYND TITTSEDLIR AALKGMI
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