| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2533 |
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| Symbol | ruvB |
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| ID | 3968728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3204865 |
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| End bp | 3205899 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921626 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_528005 |
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| Protein GI | 90022178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.26511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.321859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAGC AAGACCGAAT TATTGATGCT AACGCCAAAA GCCGCGAAGA GCAGATAGAC
CGAGCTGTAC GCCCGAAGAG CTTGAAAGAA TATATTGGTC AGCCGGTTGT GCGCGAGCAG
ATGGAAATAT TTATCGGCGC CGCGCAAGCG CGCGGTGATA GTTTGGATCA TACGCTTGTA
TTTGGGCCGC CTGGGCTGGG TAAAACAACG CTGGCGAATA TTATCGCCGC AGAAATGGGG
GCGGATCTAA AGTCCACATC TGGGCCCGTA CTCGAGAAAG CTGGCGACCT AGCTGCTCTA
ATGACAAACT TAGAGCCGGG CGACGTTTTA TTTATTGATG AAATACATCG ATTAAGTCCG
GTGGTAGAAG AAATATTATA CCCCGCGATG GAAGACTTTC AGTTGGATAT CATGATTGGT
GAGGGGCCAG CCGCGCGCTC TATTAAGCTT GAATTACCGC CGTTTACGCT TGTCGGGGCA
ACTACGCGTG CAGGGTTGCT TACTTCCCCT TTGAGGGATC GATTCGGAAT TGTTCAGCGT
TTAGAGTTTT ACAATATTGA AGATCTCACT CATATTGTTG AGCGTTCTGC GTCCTTGATG
GGGGTTGCTA TGGATACTCC CGGTGCAAGG GAGGTTGCTA AACGGTCTCG TGGAACACCG
CGCATTGCCA ATCGTTTACT GCGTCGCGTA CGAGATTATG CTGAAGTTAA ATCAGATGGT
ACGGTAACAG CGCAAATTGC AGATCTTGCT CTTAATATGC TCAACGTTGA CGAGCACGGC
TTTGATCATA TGGATCGCAG GCTATTGCTC ACGCTTATAG AAAAATTTGG TGGCGGACCG
GTGGGTGTCG ATAGCCTGGC AGCAGCAATT AGTGAAGAGC GCGACACGAT AGAAGACGTG
CTTGAGCCGT ATCTTATTCA GCAGGGGTTT ATTATGCGTA CTCCGCGTGG TCGAATGGCT
ACTCAATTGG CATATCAACA TTTCGGTTTG AATGTGCCTG CAGCGCTAAA GCAAGATTCG
CTTCCTGGCA TATAA
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| Protein sequence | MIEQDRIIDA NAKSREEQID RAVRPKSLKE YIGQPVVREQ MEIFIGAAQA RGDSLDHTLV
FGPPGLGKTT LANIIAAEMG ADLKSTSGPV LEKAGDLAAL MTNLEPGDVL FIDEIHRLSP
VVEEILYPAM EDFQLDIMIG EGPAARSIKL ELPPFTLVGA TTRAGLLTSP LRDRFGIVQR
LEFYNIEDLT HIVERSASLM GVAMDTPGAR EVAKRSRGTP RIANRLLRRV RDYAEVKSDG
TVTAQIADLA LNMLNVDEHG FDHMDRRLLL TLIEKFGGGP VGVDSLAAAI SEERDTIEDV
LEPYLIQQGF IMRTPRGRMA TQLAYQHFGL NVPAALKQDS LPGI
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