| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2527 |
|---|
| Symbol | |
|---|
| ID | 3968754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3199819 |
|---|
| End bp | 3200586 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637921620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527999 |
|---|
| Protein GI | 90022172 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000191168 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCA AATTAACCAT CACCTCTGTG GCGTTCTTGT TCGCTTCCCA AGTTTTCAGT
CAGGCGCATG TGGTCGACCC GCAACCACAG CCTGGCATGG CCGCAAAACC GCAAAAAATG
CCAGAAGAGG TCGCTCCGTC GCCGCAGAGC CAGTCGGAAA TCTACTATCA ACTGCAATTG
CTGCAGCAAG AAGTACTACA ACTGCGTGGT ATGGTGGAAG AGCAGGCTCA CGAATTGAAG
CGTTTAAAGC AGCAGCGCCT TGATGATTAC CTGGATTTAG ACCGCCGTTT AAGTAAGGTT
GGCCAAGGTG ATTTCACCGG CACTAAAACC ACACTTACCG ATATTCGCTC TACCGCTGAA
TCTGCCGCAG CCGCAAGTGC AGGTGCACCT GAGCAGGAAT TGCAGGAATA CAAAGATGCC
ATTGACTTGG TATTGCGCAA ACAGGATTAC AAAAACGCAG TTATCGCGCT AAAGCAGCAC
CTAGATAATT ACCCCAAAGG CCGCTATGCC GCCAACGCAC AATACTGGCT GGGCGAGCTT
TATCTTAAAG ATAACGAGTT AGAGCAGTCG CGGCAGTGGT TCTCACGCCT GTTAGGTGAG
TTCCCCAATC ACACCAAAGT ACCTGATGCT AAATATAAGT TAGGGCGTGT ATACGACATG
ATGGGCGATA AGGCTACGGC CAAAAAGATG TTGCAGGAAG TGGTTGCATC TAAAACGTCG
GCATCTAATT TGGCGCGAGA CTACCTCGAT ACGCACTTTA CTGAATAA
|
|---|
| Protein sequence | MISKLTITSV AFLFASQVFS QAHVVDPQPQ PGMAAKPQKM PEEVAPSPQS QSEIYYQLQL
LQQEVLQLRG MVEEQAHELK RLKQQRLDDY LDLDRRLSKV GQGDFTGTKT TLTDIRSTAE
SAAAASAGAP EQELQEYKDA IDLVLRKQDY KNAVIALKQH LDNYPKGRYA ANAQYWLGEL
YLKDNELEQS RQWFSRLLGE FPNHTKVPDA KYKLGRVYDM MGDKATAKKM LQEVVASKTS
ASNLARDYLD THFTE
|
|---|
| |