| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2488 |
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| Symbol | |
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| ID | 3968565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3140765 |
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| End bp | 3144094 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921579 |
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| Product | ribosomal-protein-alanine acetyltransferase |
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| Protein accession | YP_527960 |
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| Protein GI | 90022133 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.876623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC AAAATAAAAA TAAATTTACT CACAGTATCC AAAAAACACT TATTCAGTGG
TTTTTACTGC TTTCTTTAGT GCCGCTTTTC TTGGTTGCGT TTATAGGGTA CCAAGTTGCG
CGCAATAGTT TGGTCGCCTC GGCACAAGAT CACCTAGAAA GCGATGCGCG CAACACGATG
AACTTTTTAA ATAATTGGTT TGAATACCGA TTAATGGATA GTTTAAGCGG CGCGCAGGAC
GAAAATAACA TTAAGTTTTT ACAGGAATTA CATGAGGCTG CCGTACAAAC TGAGCTATCA
ATTGAATCAT TTCATAAAAG TATAAAATGG GCAGAAATCA CGGCCAGTCG ACAAGGTGGT
TTGGTTGATA TATCGCGCAA CTACGATTAC ATCTACGACG TTTTTTTAAT AGATGTTGAC
GGTAATATAT TATTTACCGT CGCGAAAGAA TCTGATTTAG GCACTAATTT AGTCCACGGT
AAGTATGCTA ATACGAAATT TGGTGGTACT GTGCGCAAAA CCTTGGCAAC TGGGCAAACG
CTGTTTGCCG ATTTCGAACA TTACGAACCA TCAGCGGGAA TAATTGCAGG GTTTGTCGTA
TCGCCTCTGG TAAATAGTGA AGGCCAACGC ATAGGCGCGT ATGCGATGCA ATTTCGTATA
GATCGTATAA TAAACCATTT AAAATTAAAT AGTGCATCTA TGTATAGGCA TTACTTAGTG
GGGCCAGATG GCACACTGCG CACGCAGCGC CGACAAAGCG AACAGCTTCT AATTACACAA
ATAAACACTG CACCTGTTAA ACGCTGGCTA GAAGCGAATG AGACTGCCAA GCATAGCGAT
AAGCCCAAAC TAATAAAATA TTCCGAAGCT GACGGTACTG TGTATTTGGG GATGCACCAA
AACCTTACGC TGCGAAATCT GGATTGGTTG TTGGTGAGTG AAGTCAAAGA AGCAGATGCA
CTCGCTTCGT CAAATTGGTT GGCGGGAGTG ATGTTGCTAT CTGTGTGGTT CACGGCCATG
TTGCTTTCCG TGTTAGCCTT TTTTCTGTCG ATACGTATTA CCAACCCTAT TAAAGCCATT
ACCATTGTGG CTAATAAATT GGTTAAAGGC GATTTTTCTC AGCGAGTGCA GGTGCAGGAA
TCCAATGAGT TTGGGCTGCT GGCCAATAGT TTTAATGAGC TTATTCAATC GCGTAAATAT
TACGAGCTAG AGTTGCTCGC CGCTAAAAAC GAAGCGGAAA GTTCCAGTAG AGCAAAATCT
GAATTTTTAG CCTGTATGAG TCATGAAATA CGTACCCCTA TGAATGGGGT GTTAGGCATG
CTTGGGTTGG TGCTTAATTC ATCTCTAACG CCCGAGCAGG AGCGCAAACT GCTTCTGGCC
CAGTCTAGTG GACAATCGTT ATTAAGCGTG ATTAACGATA TTTTGGATTA TTCCAAAGTT
GAAGCGGGCA AGCTCGAACT AGAGCATTTA GATTTTGATC CACACCGATT ACTCTCGGAT
GTAGTTCAAT CATTTAACTA TTCCGCGCAA GAAAAAGGTA TAGAGCTGGT GTTAGATGAT
ATTGGCTTAG GGGGCAAAGT GTTGCGTGGT GACCCGAGCC GCTTGCGCCA AATAATAAAT
AACTTATTGA GTAACGCACT CAAGTTTACT TCGCAGGGCG AAATTATTGT ACGTGCAAAA
CTAGATTCAG AAATAAATGG GCTAAATCAG TTGCGGTGCA GTGTGACGGA TACAGGTATA
GGTATTCCCA GCGATAAAAT AAGTGGTTTA TTCGATTCAT TTACACAAGT AGATAGCTCT
ACAACACGGC GTTACGGTGG CACAGGTTTA GGGCTTTCTA TTTGTAAAAT GCTAACCCGA
ATAATGGGCG GAGATATTTT TGTTGTAAGC GAAGTAGGTA AAGGTACAAG GTTTGATTTT
GTTGTGCATG TAGAAACAGG CAGTTGCCTG CCGGTAGATA ATGCCGAAAG TGATGTAACA
GGTTTGAACG TATTGCTAGT AGACGACAAT CTTACTAATT TAGATGTAAT TTCTGGGCAG
TTAATTAGCT GGGGAATACA TGTGACTAAG GTGGCCGGGC CTGAGCAGGC GTTGGTACTT
GTTGCAGAAG TACAAGATAC GGTATTTGAC CTTGTGCTTA TGGATTGCCA TATGCCAAAT
ATAAATGGCA TAGATTTAGC GGAAAGAATT CAGGGTTCAC CTTGTATTAA GCCGAATAGT
GTAATTATTT TAAGTTCTAG CGCAGATATG GCCTCGCGAT TCCATATGCA AGAGGTCGGT
GTGGTCGGCT GCTTAATGAA GCCCGTTTCC GCACCTTACC TTCATCAAGC GATACAATAT
TTTATTCAAA TTAAAAAGTC GAATAAGCAA CAGTTTATTA CACCTGCATT GCTTGAGTCT
GTGCATGCTA CAACGGAATC AACTGCTAAC CCCAATATTG TTTGGGGCGA TAATGTTCGA
ATTTTAGTGG TGGAAGATAA TTTAGTGAAT CAGCAAGTAA TAGCTGGCAT ATTAGAAGAC
TTTGGTTTGG CATTCACCTT GGTTGACGAT GGTCAGCAAG CTATTTCCGC GCTAAAAGAA
AATACTGGTG ACTTGCGCTA CCACTTTGTA TTTATGGATT GCCAAATGCC GGTGCTTGAC
GGGTATAACG CTACCAAACA AATTCGCGAA GGGGCGGCAG GCGAAGAATG CAAAATTGTG
CCTATCGTTG CGTTAACTGC AAACGCTATG CAAGGTGATA GGGACAAATG TTTGCGAGCT
GGCATGAATG ATTATGTTGC AAAGCCGGTA GATGCTGATG AGGTGAGGTT GGCGCTTGTA
AGCTGGTTGC CTGCAGAACT AAGAACAGAT GAGGCGGCTA TAGAAAATAA CCCAGAGACC
CCGGACACCC CAGATATATT AGAAAAAAAA TCGCCACCTG CAGAAGAAAA TCCGGTTGAA
CCGCAAGTGG TAAAGGTGGA CTTAGGCTTA CTTAAATTAC CAAAAGGGCT GGTTATTCAC
ACCCCAGCAA TGTTGCAGCC CATGTTTAAG AATAAGCCAG AGCGATACGT TAAAATTCTT
ACAACGCTTC TCAATGCTCA CGCCTCGTTT AATACGTCGT TAAACGAGGC TTTTGCAAAT
AACGATACAG AGCAAGTGCG CCACCTAGTG CATGCCATGA AAGGCTCAAG TGGCAATATA
TCAATGGGCA AGGTTCATGA ATATTGTAAA CAAGTAGAGG CTCAAATCGA TGCGGATGGC
GCTGCAAGTG CAGAGTATAT AAACAAATTA CAACAACTGA TAGAAGCGAT GTTTGACGAG
GCGAATCAAA TAGTCGAATT AAACAGTTGA
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| Protein sequence | MSKQNKNKFT HSIQKTLIQW FLLLSLVPLF LVAFIGYQVA RNSLVASAQD HLESDARNTM
NFLNNWFEYR LMDSLSGAQD ENNIKFLQEL HEAAVQTELS IESFHKSIKW AEITASRQGG
LVDISRNYDY IYDVFLIDVD GNILFTVAKE SDLGTNLVHG KYANTKFGGT VRKTLATGQT
LFADFEHYEP SAGIIAGFVV SPLVNSEGQR IGAYAMQFRI DRIINHLKLN SASMYRHYLV
GPDGTLRTQR RQSEQLLITQ INTAPVKRWL EANETAKHSD KPKLIKYSEA DGTVYLGMHQ
NLTLRNLDWL LVSEVKEADA LASSNWLAGV MLLSVWFTAM LLSVLAFFLS IRITNPIKAI
TIVANKLVKG DFSQRVQVQE SNEFGLLANS FNELIQSRKY YELELLAAKN EAESSSRAKS
EFLACMSHEI RTPMNGVLGM LGLVLNSSLT PEQERKLLLA QSSGQSLLSV INDILDYSKV
EAGKLELEHL DFDPHRLLSD VVQSFNYSAQ EKGIELVLDD IGLGGKVLRG DPSRLRQIIN
NLLSNALKFT SQGEIIVRAK LDSEINGLNQ LRCSVTDTGI GIPSDKISGL FDSFTQVDSS
TTRRYGGTGL GLSICKMLTR IMGGDIFVVS EVGKGTRFDF VVHVETGSCL PVDNAESDVT
GLNVLLVDDN LTNLDVISGQ LISWGIHVTK VAGPEQALVL VAEVQDTVFD LVLMDCHMPN
INGIDLAERI QGSPCIKPNS VIILSSSADM ASRFHMQEVG VVGCLMKPVS APYLHQAIQY
FIQIKKSNKQ QFITPALLES VHATTESTAN PNIVWGDNVR ILVVEDNLVN QQVIAGILED
FGLAFTLVDD GQQAISALKE NTGDLRYHFV FMDCQMPVLD GYNATKQIRE GAAGEECKIV
PIVALTANAM QGDRDKCLRA GMNDYVAKPV DADEVRLALV SWLPAELRTD EAAIENNPET
PDTPDILEKK SPPAEENPVE PQVVKVDLGL LKLPKGLVIH TPAMLQPMFK NKPERYVKIL
TTLLNAHASF NTSLNEAFAN NDTEQVRHLV HAMKGSSGNI SMGKVHEYCK QVEAQIDADG
AASAEYINKL QQLIEAMFDE ANQIVELNS
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