| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2483 |
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| Symbol | |
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| ID | 3968560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3135518 |
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| End bp | 3136972 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921574 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_527955 |
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| Protein GI | 90022128 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00279185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTGGC CAACTGCCCA AATCCACCCG CTTACCCCTT TTAACGTAGA TATACTGGCC
AAGCCAGCCA CCCTTAAAAA ATATGATTTG GCCGGGCCTA GGTACACGTC GTACCCAACT
GCGCCACAAT TTACTAACAA CTTCACTCAA CAACATTGGC AGGCAGCGGT AAGTAAGGGT
AACAAAGCAC AAAAGCCACT GTCGCTTTAT TTCCACATTC CCTTTTGCGA TACGGTTTGT
TATTACTGCG GCTGTAATAA AATTATTACT GCCAACAAAG CTAAATCTAC CCCCTATTTA
ACCGCCATTA TTAAAGAAAT GGATTTGGTT GCCGCGCAAG TGGATACCAC TCGACCTGTG
CAGCAATTAC ATTTTGGTGG CGGCACACCT ACTTTTTTAA GTGACGAACA GCTAACAACA
CTAATGAACG CTGTAAAGGC ACGCTTTAAT GTAGCCGATA GCGCGTTTCG AGATTTTTCT
ATAGAAGTTC ACCCAGCAGG AGTTACGCCA CAACGCATTA AACATTTACG CACTATTGGG
TTTAATCGTG TAAGTATGGG CATACAAGAT TTCTCGCCCG ATGTACAAAA GGCTGTAAAC
CGTTTTAACA GCCCGCAACA GGTTGGCGAA CTGGTAACAG CAGTGCGGGA AAATAATTTT
GCATCGTTAA GTATGGATTT AATATACGGT TTACCTAAGC AGACGGCGGA ATCGTTTGCT
GAAACCCTGC AAAAAATAAT TGCGTTGTCG CCGGATAGAA TCGCGCTATT TAACTATGCA
CACCTGCCCC ACTTGTTTAA AACGCAAAAA CAAATTAACG CCCGCGAGCT ACCAGAGCCA
CAAGAAAAAT TAATTATTTT GCAGCAGAGC ATTCAAAGTC TGTGCAATGC TGGCTATCAG
TTTATTGGTA TGGATCACTT CGCCAAAGTG GACGACTCTC TCGCGGTTGC CCAACGCGAA
GGTGAACTGC ACAGAAACTT TCAAGGGTAT AGCACACACG GCGACTGCGA TTTATTGGCG
TTTGGTGTTT CGTCTATTAG CTCTATTGGC AATACATACA GCCAAAACAG TAAAAATTTA
ACCGAATATT ACGCTGCAAT AAATACAAAC CAGCTGCCCA TAATTAAAGG CTTAACATTA
ACAGATGATG ACTTACTTAG GCGCGAAGTT ATTAGCCAAA TAATTTGTAA CTTTGAGCTA
GATTATCAAA AAATTAATCG CCAATTTGGA ATTGATGTAG CACAGTACTT TGCCGACGCG
CTTACCGAAC TAAAGGTGTT TGAAGAGGAT GGCCTAATTG AATTTACACA AGCGAAGCTA
AACGTAAAAC CCTGCGGCAG GCTTCTGGTA AGACGAATTT GCATGGCTTT TGACAGCTAT
GTAAGCAGCC AGGTAAGCAG TTATGCGAGC CAGCAACAAA GTGCAAATAC ACCGCAGTAT
TCTCGCATTT TATAA
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| Protein sequence | MTWPTAQIHP LTPFNVDILA KPATLKKYDL AGPRYTSYPT APQFTNNFTQ QHWQAAVSKG
NKAQKPLSLY FHIPFCDTVC YYCGCNKIIT ANKAKSTPYL TAIIKEMDLV AAQVDTTRPV
QQLHFGGGTP TFLSDEQLTT LMNAVKARFN VADSAFRDFS IEVHPAGVTP QRIKHLRTIG
FNRVSMGIQD FSPDVQKAVN RFNSPQQVGE LVTAVRENNF ASLSMDLIYG LPKQTAESFA
ETLQKIIALS PDRIALFNYA HLPHLFKTQK QINARELPEP QEKLIILQQS IQSLCNAGYQ
FIGMDHFAKV DDSLAVAQRE GELHRNFQGY STHGDCDLLA FGVSSISSIG NTYSQNSKNL
TEYYAAINTN QLPIIKGLTL TDDDLLRREV ISQIICNFEL DYQKINRQFG IDVAQYFADA
LTELKVFEED GLIEFTQAKL NVKPCGRLLV RRICMAFDSY VSSQVSSYAS QQQSANTPQY
SRIL
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