Gene Sde_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2470 
Symbol 
ID3964917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3121253 
End bp3121696 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID637921561 
Productketosteroid isomerase-related protein, cystatin fold 
Protein accessionYP_527942 
Protein GI90022115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.4042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TCGTTGACAA CATTATCCAG CTCTATTGCG AGTTCGATCA TGCCAACCTT 
GACGCTCTTG GCGATATCTA TCATCGGAAT ATTGTTTTTG TAGACCCGGT TCATCGCCTT
AAGGGCCTAG ATGACCTTGT GAGCTATTTT AAATCCACCA TGCAAGGCAC CAGTGAGTGT
GTCTTTAGTT TTAGCAGCCC CATTGTAGAT GGCACCAATG CTTGCCTTGA GTGGCAAATG
CACTACCGCC ACCCAAAGCT GAAAGGTGGC GATAGGTTAA CGCTCGATGG CGTTTCTCGG
GTGCAGATAG CCGGTGAGCA GGGGGCGGAT ATGCGAATTA TTTACCAGCG TGACTATTAC
GATTTAGGGG CAATGTTGTA CGAGCATATC CCTGTGCTTG GGCGTGTTGT TGGTTCGCTT
AAAAATCGCT TAGCTGTGCA GTAA
 
Protein sequence
MKKLVDNIIQ LYCEFDHANL DALGDIYHRN IVFVDPVHRL KGLDDLVSYF KSTMQGTSEC 
VFSFSSPIVD GTNACLEWQM HYRHPKLKGG DRLTLDGVSR VQIAGEQGAD MRIIYQRDYY
DLGAMLYEHI PVLGRVVGSL KNRLAVQ