| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2454 |
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| Symbol | |
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| ID | 3965401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3102526 |
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| End bp | 3104253 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921545 |
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| Product | regulatory proteins, IclR |
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| Protein accession | YP_527926 |
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| Protein GI | 90022099 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.283629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTAACA TTAGCTATAC GGATGTATTG GTAGTCGGTG CTGGCCCGAT TGGGCTTTCG
CTGGCAATTC AGCTTAAGTC ACAGGGCTTT ACTCAGTTTC GAGTAATAGA TAAAACCGAT
GAGCCTGGTG AGAAATTAAT TTCAAGTATT TCTCGGGCAA TTGGTGTGCA TGCTCGCACG
CTAGAGGTGC TGGAGGATGT AGGGGTAACC CCTTCATTGC TAGAGCGCGG TAAGATCGCC
CATACGGCGA GTAATTATTA CAACTCCAAG CTTACATACC GTGTAGATTA TCCATCGGGT
TGCGATACCA GTCATGTTAA ATATAACTGG AACTTTATGG TAACTCAGGG AAATACCATT
GATGTTTTAC ACACCCATCT TAGTAAGAAA CTCGATCATA AAGTGGAATG GAATACTTCA
CTTGTTGAGT TTAAAGAAAC CGATGCGGGT ATTACCGCAA TTATTAAGAA TGATATTACC
GGCGAGTTAG AAACCATCAA TGCCAAATAT TTAGTGGGGT GTGATGGTTG CCACAGTGCT
GTTCGTAAAG GGCTGGGTAT TGATTTTCCT GGCAAAGTTT ACCCTGTTAA ATGGGTAGTG
TGTGATCTCG ATATTGAATG GGATATTCCG CACGACGATA TAACATTTTT GGGAATAAAG
AATGCCTACG CTATTGCGCT GCCATTGGCT GGCGGTGGCG AAGGGCGCTT CCGGGTAACC
ATGGGTATGC CGCTTACCGA AGAGGAGAAA AAAGATCATT ACGAACACGC TCAGCCAATT
CGCGGTGGTC GATTTGGAAA AGAAGAGTGC GTGGCTTTCT TTAAAAAGCT TTACCCCTCC
GCCAAAGTTA AATCTACACC TGCTGAACCG CAGCAGTGGT TCCAAGTTCA TTGCCGAATG
GCAACAACCC TTGCAAAAGG CAATTGCTTT TTAGTGGGGG ACGCTGCTCA CGTGCACAGC
CCCGTGCTAG GGCAGGGCAT GAATATGGGT ATTCAAGATG CCGCCAATCT TGCTTGGAAA
TTGGTAGCCG TTTGCCGTGG CGATAGCTCG CCTAAACTGC TCGATACCTA TAAGCAGGAA
AGAGAATTTT CAGATACAGA AATAGTAAAT TTTGTAGATA AAGTAACAAA ACTTGTTATC
ACACCTTCGC GTTTTATTCA GTACGCGCGC GGTTTTGTCT TAAGTCGTAT CCTTAAAGTT
ACCCCAGGCC GACGTAAGCT GGTTTCAAAA GTTATGCAGC TTTCTGTTAA CTATGTTGGC
AGCGAAAGCC CGTTAGTTAA AGATAAGTGG AGCGGCTCTA AGGGTGTTAT GGCTGGTCAT
CGCATTCCAG ACCCTATTGT TGATGAGTCT AGTGGTAAAC GCCTATTTGA ACTCATAAAA
GGCAACAAGT GGAATGCCTT AATTTTTATT GGCCGTTCGC CTTCAGCAGA AGAAAAGGCT
GCGGCATATG AAGTCGCGGC GAAAGTGCAT GAGAACTATC AAGGGCTAGT AACGGCGCAT
ATCGTACAGT ACGGCAACGC CAGCGAGGCA AAGCCCAGCC CGTTATCAAT GTTAAGTGAT
CAGAGCGGCG TATTGCATCA GGTGTTTGGT GTAACTAAGC CCGCCATTTA TTTGTGTCGA
CCAGACCGCT ATGTAGGCTA TAGGGAAACA GGTTTCAATC ACTGTTTCGA CTATATGGAG
AAAATCTATC CCTCATTTAT GGCTACAGGA GAGTTGCTAT ATGGATAA
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| Protein sequence | MSNISYTDVL VVGAGPIGLS LAIQLKSQGF TQFRVIDKTD EPGEKLISSI SRAIGVHART
LEVLEDVGVT PSLLERGKIA HTASNYYNSK LTYRVDYPSG CDTSHVKYNW NFMVTQGNTI
DVLHTHLSKK LDHKVEWNTS LVEFKETDAG ITAIIKNDIT GELETINAKY LVGCDGCHSA
VRKGLGIDFP GKVYPVKWVV CDLDIEWDIP HDDITFLGIK NAYAIALPLA GGGEGRFRVT
MGMPLTEEEK KDHYEHAQPI RGGRFGKEEC VAFFKKLYPS AKVKSTPAEP QQWFQVHCRM
ATTLAKGNCF LVGDAAHVHS PVLGQGMNMG IQDAANLAWK LVAVCRGDSS PKLLDTYKQE
REFSDTEIVN FVDKVTKLVI TPSRFIQYAR GFVLSRILKV TPGRRKLVSK VMQLSVNYVG
SESPLVKDKW SGSKGVMAGH RIPDPIVDES SGKRLFELIK GNKWNALIFI GRSPSAEEKA
AAYEVAAKVH ENYQGLVTAH IVQYGNASEA KPSPLSMLSD QSGVLHQVFG VTKPAIYLCR
PDRYVGYRET GFNHCFDYME KIYPSFMATG ELLYG
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