| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2426 |
|---|
| Symbol | |
|---|
| ID | 3966646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3071804 |
|---|
| End bp | 3072475 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637921517 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_527898 |
|---|
| Protein GI | 90022071 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.374899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAT CACTTAACGA AACCCGCGTT ATTGGCGTAT TAATTGAAAA GGAAGTTACC
ACCCCCGACC AATACCCAAT GTCACTTAAC GCCTTAACCA ATGCATGCAA CCAAAAAACA
AATCGAGAAC CGGTTTTAAA CCTCTCCGAA ACCGAAGTGC AAGAGAGTTT AGATGCATTG
GCAAAGCAAG GGTTAGTGGT CGAGTCTAGA GTCGGCAATC GCATACCCAA GTACAAACAT
AGGTTTTGCA ATAGCGAATT TGGCGAGCTG CAATTCACCA AGCAAGAGCT AGCAATTGTA
TGCACGCTTT TTTTGCGCGG CGCTCAAACA CCCGGGGAGC TGCGCACTCG CACAAATAGA
CTGTGTACAT TTGCCGATGT GCAGGAAACA GAAAAGGTAC TTCAGGGCCT CATTGACCAT
AGCCGCGGTA GCTATGTGGT AAAACTGGAG CGCGAGCCAG GCAAGCGCGA ATCGCGTTAC
GCCCATCTTT TTAGTGGCGA TGCAGCCACA ACAGTTGCGC AAATACCGGC AACCACCAAT
ACTTCAACCC CAGCGCAAAG CAATAGTCCA CAAAACAATG CAGAACTGCT TGAACGAGTA
GAAATGCTTG AATTAACAGT AGAAGAGTTA CAGAACCAAA TAAATAAATT AGTCGAACAA
CTTGGCGGCT AA
|
|---|
| Protein sequence | MKLSLNETRV IGVLIEKEVT TPDQYPMSLN ALTNACNQKT NREPVLNLSE TEVQESLDAL
AKQGLVVESR VGNRIPKYKH RFCNSEFGEL QFTKQELAIV CTLFLRGAQT PGELRTRTNR
LCTFADVQET EKVLQGLIDH SRGSYVVKLE REPGKRESRY AHLFSGDAAT TVAQIPATTN
TSTPAQSNSP QNNAELLERV EMLELTVEEL QNQINKLVEQ LGG
|
|---|
| |