| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2405 |
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| Symbol | |
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| ID | 3966062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3048853 |
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| End bp | 3049563 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921496 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_527877 |
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| Protein GI | 90022050 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.561649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTT ACAGCGAAAT CACCTCTAAC GGCTTGTGGA AAAACAACCC CGCGCTGGTA
CAACTTTTGG GTTTATGCCC ACTTCTAGCG GTAACTGGCT CGGTAGTAAA TGCTCTTGGT
TTAGGCTTGG CAACCCTGCT TGTACTCATT GGGTCTAACG TTGCGGTTTC GTTAATTCGC
AATGCAGTTA GCGATGCTGT GCGCTTACCG GCCTTTGTGA TGATTATTGC TGCCTTTACC
ACCTGCACCG AATTAGTGAT GCAGGCATTT ACTTTCGAGC TTTATCAAAT ACTAGGTATT
TTTATTCCGC TTATTGTTAC CAACTGCTCT ATTCTCGGCC GCGCCGATGC CTTTGCCAGT
AAAAACAAAG TACTGCCTTC AGCAGTAGAC GGTTTTATGA TGGGTATGGG CTTTTTACTA
GTGTTACTGG TAATTGGCGC AGTACGCGAA ATTATTGGCA ACGGCACACT TTTCGAAAAC
ATGCATTTGT TGTTTGGTGA AGCGGCGCGC AACTGGCGAC TGGATTTATT TGGTGAAGGC
TATAAAGGCT TTTTGGTGGC GGTATTACCA CCCGGCGCAT TCTTAGTTAC AGGCCTATTA
ATTGCCGTTA AAAATATGGT GGATGCAGAA TTAAAACGCC GCGAAGATGC GCGTAAAGCC
AAACCGGTAA AAGGCTCTAA ACGCGTGCGT ACTACAGGCC AAATCGCTTA A
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| Protein sequence | MATYSEITSN GLWKNNPALV QLLGLCPLLA VTGSVVNALG LGLATLLVLI GSNVAVSLIR
NAVSDAVRLP AFVMIIAAFT TCTELVMQAF TFELYQILGI FIPLIVTNCS ILGRADAFAS
KNKVLPSAVD GFMMGMGFLL VLLVIGAVRE IIGNGTLFEN MHLLFGEAAR NWRLDLFGEG
YKGFLVAVLP PGAFLVTGLL IAVKNMVDAE LKRREDARKA KPVKGSKRVR TTGQIA
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