| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2403 |
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| Symbol | |
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| ID | 3966060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3047112 |
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| End bp | 3048185 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921494 |
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| Product | electron transport complex protein RnfD |
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| Protein accession | YP_527875 |
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| Protein GI | 90022048 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.469732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTAT TTAAAATAAC CTCTCCACAC GCAACCAAAG CTGGCGACAC TGGCACTGTA
ATGCGTTGCG TTTTATTGGC TACCCTGCCA GGGCTAGTTG CATTAACCGC ATTCTTTGGT
ATTGGCTCTA TTATTAACGT AATACTTGCC TGTACCTTTG CCGTTGCCTT TGAAAGCGCC
GCGCTGGCAC TGCGCAATCG CCCCATTGCA TTTTACCTTA AAGATTTTAG TGCAATTGTA
ACCGCTGTAC TGCTAGCGCT TGCACTTCCA CCCTACGCGC CGTGGTGGCT GGTAGCGGTT
GGCGTATTCT TCGCAATTGT TGTAGCTAAA CATTTATACG GTGGCTTGGG TTATAACCCG
TTCAACCCCG CTATGGTTGG CTATGTTGTA CTGCTTATCT CGTTCCCCTT AGAAATGACC
ATGTGGGCAG CCCCCGTTTC TGCGCTAGGC GACGGCGGTC ATTTACCTTC GCTGGGTGAC
GCGCTTGCAA AAGTATTTAT GGGCGTTGAA TTTGTTAGCG GTGAGCTAGA TGGCTATACC
GCCGCCACCC CGTTAGATGT TCTGCGCCAA AACAGCAGTT TATTACTGCC CGATTTATAC
ACGCAAAGCC CGGCCTTTGC CCAAGCCAAG TGGGCTGGTG CCGGCTGGGA ATGGGTAAAC
CTAATGTTTT TAGCCGGCGG CGCTTACTTG CTGTACATGC GTGTTTTTAC ATGGCACGCA
CCGGTAAGCA TGTTGGCTAC CCTAGGCATA TTAGCGGCTC TTTTCTACGA TGGCGGCAGC
TCTGCAAGCT TGGGTTCCCC GCTTTTTCAC TGGTTATCTG GCGCCACTAT GCTGGGTGCG
TTTTTTATTG TTACCGATCC GGTAACGTCT GCGGTAAGTA CACGTGGCCG AATTATTTAC
GGTGCACTTA TTGGTTTAGT TGTGTTTGTG ATTCGCAGCT GGGGCAACTA CCCCGATGGC
GTAGCCTTCG CAGTACTACT TATGAATTTT GCCGCGCCCT TTATTGATTA CTACACTCAA
CCCCGCACCT ATGGCCATAA GAAGCCAACG GTTGCCACTA AAAAAGCCGA GTAA
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| Protein sequence | MALFKITSPH ATKAGDTGTV MRCVLLATLP GLVALTAFFG IGSIINVILA CTFAVAFESA
ALALRNRPIA FYLKDFSAIV TAVLLALALP PYAPWWLVAV GVFFAIVVAK HLYGGLGYNP
FNPAMVGYVV LLISFPLEMT MWAAPVSALG DGGHLPSLGD ALAKVFMGVE FVSGELDGYT
AATPLDVLRQ NSSLLLPDLY TQSPAFAQAK WAGAGWEWVN LMFLAGGAYL LYMRVFTWHA
PVSMLATLGI LAALFYDGGS SASLGSPLFH WLSGATMLGA FFIVTDPVTS AVSTRGRIIY
GALIGLVVFV IRSWGNYPDG VAFAVLLMNF AAPFIDYYTQ PRTYGHKKPT VATKKAE
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