Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2395 |
Symbol | |
ID | 3967915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3037638 |
End bp | 3038267 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637921486 |
Product | dihydroorotase homodimeric type |
Protein accession | YP_527867 |
Protein GI | 90022040 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.316907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.063783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATT TAGATAATCT TTTCCAGAGC AACAAAGATT GGGCAGAAGC AATTAAGGCC GAAGACCCGC ACTTTTTCGA AAAACTTTCT GCACAACAGT TCCCTGAGTA CTTGTGGATT GGCTGCTCTG ATAGCCGCGT ACCCGCCAAC CAAATTGTTG GCTTAATGCC AGGTGAAATG TTTGTACATC GCAACATTGC TAACTGTGTG GTACACACCG ACCTAAACTG CCTTTCTGTA ATTCACTATG CGGTATCGGT TCTTAAAGTT AAGCACATTA TTGTAACTGG CCACTACGGC TGTGGCGGTG TGGCAGCCGC GCTCACCAAT CAACAATTTG GCTTGGTAGA CCACTGGATT CGCAATATCC GCGATGTGTA CCAAAAACAA AAAGCCGAGC TAGAAAACAT TACCGACGAG AAAGAGCGCT TGAACCGGTT ATGTGAGCTA AACGTTAAGC AACAGGCGCT AAATGTAACT GCGCTACCCG CTGTGCAAAA CGCATGGAAA GAAGGCCGAG AGCTTACTGT ACACGGCTGG ATTTACTCAC TTGAAGATGG CCTACTGAAG AAGCTTACCG ACAGTATCGG CAGCATTGAG CAGGTTGCAG AGCAGTTCCG CGTTATCTAA
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Protein sequence | MNDLDNLFQS NKDWAEAIKA EDPHFFEKLS AQQFPEYLWI GCSDSRVPAN QIVGLMPGEM FVHRNIANCV VHTDLNCLSV IHYAVSVLKV KHIIVTGHYG CGGVAAALTN QQFGLVDHWI RNIRDVYQKQ KAELENITDE KERLNRLCEL NVKQQALNVT ALPAVQNAWK EGRELTVHGW IYSLEDGLLK KLTDSIGSIE QVAEQFRVI
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