| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2352 |
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| Symbol | |
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| ID | 3967385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2977752 |
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| End bp | 2979599 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921443 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_527824 |
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| Protein GI | 90021997 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1
[COG3302] DMSO reductase anchor subunit |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.525295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCAA CAAGAGCTGA CGAACCCGAA TACGCAAAAT TAAAAGACCC AGTAACGGCC
GAAACAAGCC GTTACGGTAC GCCAATTAAA CTTACGCCCG TTGGCGATAA CGGCGTAAGT
TTACGAGTAA ATGGCGATTG CGGCATTGGC GACAACCCTA ACCGCACCAA GCAACACGCG
TTTCACTTTA CTGCAGATAA CTGTATTGGT TGTCACGCAT GTGAAGCAGC ATGTAGCGAG
AAAAACGATT TGCCACCGCA TTTAAGCTTC CGCTCGGTAG GTTATGTAGA AGGGGGGAGT
TACCCCAACT TTACGCGCAT GAATATATCT ATGGCGTGTA ACCACTGTGA AGAGCCGGTG
TGTTTAAAAG GCTGCCCAAC GCGCGCCTAC ACCAAGCACC CAGAATACGG TGCAGTAATT
CAAGACCCAG ATATATGCTT TGGTTGTGGC TATTGTACTT GGGTATGCCC ATACAACGCC
CCGCAATTAG ACCCAGTAGC AGGGCAAGTA GAAAAATGTA ACATGTGTGT AGACCGCCTA
GAAGTTGGCT TGAAGCCAGC GTGCGTATCT GCATGTGTGG GTAACGCGCT TAACTTTGGT
GTGGTAGAAA ACACCCCAGA AAATCGCGAA CAAATAGAAA CACAAATACC GGGCTTTCCA
GATCCATCTA TTACGCGCCC CAATATTCGC TTCCAGCAAG TGAAAACAAT GCCGCGCGAA
GTTACCCGTA CCGACTCCAT GCCAGTGAAA TATCACAAGA GCAACGTGGA CGGTAAGTAC
AAACCTATTG TGGATCAGAA AAACGGCGTA GAAAAATCGT GGAACGTTGG TCGCTTGTCG
TCGCGCGAAA ATCCACTGGT TATTTTTACC TTGGTTACCC AAGCGGCAAT AGGTTTGTTT
GGTGTTAATT TCTTAGGTAG TTTGTTTGGT ATAGAAGCCT TCACCAATAT TGCCAACTCG
GTAATGTATG TGCCGTTGGT AATAGTGGCC TTAGGTTTGG CTGCGCTAGG CTTGTTTATG
TCTACCACCC ACTTGGGCAA ACCGTTGCGT TTTTATCGTG GGTTTAACAA CTGGCGTCAT
TCGCCTGTTA GCCGCGAAGG GTTAGGTGTA GTGGTGTTTA TGACCTTTGC AGGTTTACAC
ATGCTTGCCA AAATGCCAGA AAACGCCATT GTGCAATCCA TTATTGGTGA GCTAGCCATA
CCCGGCTTGG CAACCTTTGC CAAAGTAACG GGCGTATTGG GCGTAGTGGG TAGTTTGGGC
GGCTTGTATT ACATGTACCG TTGCTACCGC ATTAAAGCGC GTCCGTACTG GAACCACTGG
CAAACCGGCA CAAGCTTTGT AGGTATGGCA TTAACCCTTG GTAGCTTAGT CGCGGCAGTC
TTAACCGTAC CTTACTTTGC CATTACCGGT GGCGATTACG TAGCAGTGCT ACAGGCACTT
GCGCCAGCAT TGGTAGCGGG CTTGGTATTA GAAGGCATAG GCTTAATAGG CCACGCCAAA
GGCATGACCG ACGCAGAGCA CGAAGGCACT GTATCGCACT ATATACAATG CACCACCTTT
GGTAAGTCGT ATATTTTGCG TAACTGTTTA ATACCTCTAA ACGCATTGGC AGCGGTTGCC
CTTGCGGTAT CGGGCTTAGA TGGTTGGTTA GGTTTAATGC TGTGGTCTGG TTTGGCGCTA
TCGCTAGTTG TAAGCGCATT AATTGGCCGC GCACTGTTCT ATGTACTAGT AGTGCCAACC
ACTATGCCTG GCGCCTTCTT CTGGAAGAAC AAAGGCTTCG AAGATCACGC CCGCGAAATA
GGCCTAGCGG CCAACCCTGC GGTAGGTGTG GCGATGCATA CTCACTAG
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| Protein sequence | MIPTRADEPE YAKLKDPVTA ETSRYGTPIK LTPVGDNGVS LRVNGDCGIG DNPNRTKQHA
FHFTADNCIG CHACEAACSE KNDLPPHLSF RSVGYVEGGS YPNFTRMNIS MACNHCEEPV
CLKGCPTRAY TKHPEYGAVI QDPDICFGCG YCTWVCPYNA PQLDPVAGQV EKCNMCVDRL
EVGLKPACVS ACVGNALNFG VVENTPENRE QIETQIPGFP DPSITRPNIR FQQVKTMPRE
VTRTDSMPVK YHKSNVDGKY KPIVDQKNGV EKSWNVGRLS SRENPLVIFT LVTQAAIGLF
GVNFLGSLFG IEAFTNIANS VMYVPLVIVA LGLAALGLFM STTHLGKPLR FYRGFNNWRH
SPVSREGLGV VVFMTFAGLH MLAKMPENAI VQSIIGELAI PGLATFAKVT GVLGVVGSLG
GLYYMYRCYR IKARPYWNHW QTGTSFVGMA LTLGSLVAAV LTVPYFAITG GDYVAVLQAL
APALVAGLVL EGIGLIGHAK GMTDAEHEGT VSHYIQCTTF GKSYILRNCL IPLNALAAVA
LAVSGLDGWL GLMLWSGLAL SLVVSALIGR ALFYVLVVPT TMPGAFFWKN KGFEDHAREI
GLAANPAVGV AMHTH
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