| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2274 |
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| Symbol | |
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| ID | 3967950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2891363 |
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| End bp | 2892541 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921365 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_527746 |
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| Protein GI | 90021919 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.567279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGTTG TATTATTTAA TACACATGAC GTAGTTCTTC TATTCACGTT TTTACAATGC
ATTGTTTTAG CGTTTATTTT GTATAAACCA CAAAAAGAAC GTGCAGTTAG TAATGTGTTT
CTTCTCGCAT TCTTGTTGTC TAATGCTGTT ATTCCCTTCG AGTTACTAAT ACATTTTGGC
ACCGCCTTTA GGCCTTGGGC AATTGATCAC CTACCTAATT GGTTTTTTGT GTTCGAATTC
GGCTACTGGC TGCAAGGGCC TTTCTTGCTT TGGTATCTTC GCTCTGTATT GTATAAAACT
ATTCGCGTAC CACTGAGCGA TGCCTTTTAT TTTGTGCCGT TCGTGCTCTT TCTGCTGCAT
CAAGTAATTG GCTACCATAT TCTTTCTACC GACGAAAAAA TATCTATTCA GCAAAGCTTT
AAATTGCATA CCGAATCGTT TTCTATTTAC TACATAACCC TAATGCGCGA ACTATTGCGC
GTGTATTTTG GGGTACTGTG TTTGCTCGAA TTAAAAAATT ATTTAAAAGT TACCTCGCAA
AAGCACATTG TTGCCGACAC CAGTGATGTG CTCTGGCTGC GTATAGTGGT ATACGGCTTT
CTCGGGGTTT GGGGGTGGAG TGTACTGGTA GTGGCCATGC TGATTTGCAA CGTTCAGTTT
TTTTGGCATT TACCTGTGGG CACTATGGGA ATAATGGCCA ACTACGTTAC CTGCGGTATT
CTATGTGGTT TAGTGGTAGT GGTAGGGCGC AAGGCGCGAG TAGTCGAAAA CTTAGAGCCT
GTGAGCTCAA GTCCGCCCAA GCAGCATGCA GGCGTTACTA TTAATTTAGA GTATGTTGAG
CAGCTAGAAA AGCTTATGCA TGAAGATAAA CTCTATTTGG AATCGTCGCT TACCTTAGAG
GTGCTGGCTG GTAAGTTATC TATTTCACCG CGCACGTTAT CAACGGTTAT AAATAGGCAT
TACGGCTGTA ACTTCTTCGA GTTTATTAAC GATTTTCGAA TAGAAGACGC TAAAAAGCGC
ATGGTTGACC CAGCCAGAAG CGGGGCGACA ATGCTCGATA TAATGTATGA GGTGGGCTTT
AACAGTAAGG CGACATTTAA TAGCTTTTTT AAGAAGCACG AGGGTATGAC ACCGCGCGAA
TACCGCAAAA AAAATACGCA GGCAAAAGAA CCTGCGTAG
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| Protein sequence | MDVVLFNTHD VVLLFTFLQC IVLAFILYKP QKERAVSNVF LLAFLLSNAV IPFELLIHFG
TAFRPWAIDH LPNWFFVFEF GYWLQGPFLL WYLRSVLYKT IRVPLSDAFY FVPFVLFLLH
QVIGYHILST DEKISIQQSF KLHTESFSIY YITLMRELLR VYFGVLCLLE LKNYLKVTSQ
KHIVADTSDV LWLRIVVYGF LGVWGWSVLV VAMLICNVQF FWHLPVGTMG IMANYVTCGI
LCGLVVVVGR KARVVENLEP VSSSPPKQHA GVTINLEYVE QLEKLMHEDK LYLESSLTLE
VLAGKLSISP RTLSTVINRH YGCNFFEFIN DFRIEDAKKR MVDPARSGAT MLDIMYEVGF
NSKATFNSFF KKHEGMTPRE YRKKNTQAKE PA
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