| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2252 |
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| Symbol | |
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| ID | 3967928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2859586 |
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| End bp | 2861253 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921343 |
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| Product | L-aspartate oxidase |
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| Protein accession | YP_527724 |
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| Protein GI | 90021897 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000133883 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.532005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAG CCAAACCCTC TCGCAAAACG CTCGCCCACC CCTCCCAAAC ACACAATGTC
GATGTACTTG TTATAGGTAG CGGTGCTGCA GGCTTAACCC TTGCACTCAA TCTTGCTGGG
CATTGTAAAG TTGCCGTACT CAGTAAAGGC AACCTGCGTG CAGGCTCAAC CTGGTACGCA
CAAGGCGGTA TTGCTGCAGT TTTAGATAAT AACGACAGTG TTGAATCTCA TGTTAAAGAC
ACACTCGTTG CGGGCGCAGG CCTTTGTCAT GAAGACGCCG TAGACTTTAC CGTTAGAAAC
AGCAAAAGCG CGATTGAATG GCTAATCAAC CTCGGCGTTA ACTTTACCCG TAATGAAGAT
TCCGAAAACT ACCACCTAAC CCGTGAGGGT GGCCACAGCC ACAGACGAAT CATTCACAGT
GCTGATGCAA CAGGTAAAGC CGTGCACACT ACCCTGCTCG AGTCTGCGCA GGTTGCCAAA
GGTGTGGAGC TATTTGAAAA CTACATTGCA CTGGACCTCA TTCGACAACC AGACCCAAAC
AGCAAACGCT TGCGCTGCAC GGGGGCCTAT GTATTTAACC GCCACCAAGA CCGAGTGGAA
CTGTTTAATG CAAAAGCCGT GGTCTTGGCC ACAGGTGGTG CAAGTAAGGT GTACCTCTAT
ACCAGTAACC CAGACAGCGC TACCGGCGAC GGAATAGCCA TGGCGTGGCG TGCAGGCTGC
CGAGTGGCCA ATATGGAATT TAATCAGTTC CACCCCACTT GCCTTTACCA CCCCAAGGCC
AAAACCTTCC TTATTACCGA AGCATTGCGC GGCGAAGGGG CTAAATTGAG ATTGCCCGAC
GGGTCGCAGT TTATGCACAA CTTCCATTCG CTGGGCGAAT TAGCACCTAG GGATGTCGTA
GCTCGCGCAA TTGACCATGA GATGAAACGC CTAGGTAGCG ATTGCCTGTA TTTGGATATT
AGCCATCGCA CACCAGAGTT TATCGAATCT CACTTCCCTA CCGTGCGAGA AAAGTGCTTA
GAATTTGGGA TAGATATCAC CAAGGAGCCA ATACCTGTTG TACCAGCCGC GCACTATACC
TGCGGTGGCG TTGTGGTGAA CAACAAAGGC CAAACCGATT TACTTAACCT TTACGCAATA
GGTGAAACCT CATTCACAGG CCTGCACGGC GCTAATCGCA TGGCGAGCAA TTCGCTACTA
GAGTGCATTG TATACGCCCG CTCTGCATCC GAATCGATAC TCGCCACTTT AAATAACATT
GCCCCACCGC AGGCTTCACC ACAATGGGAT GAATCGCGGG TAACCAACTC CGATGAAGAC
GTTGTGATTT CGCACAACTG GGATGAATTG CGCCGCTTTA TGTGGGATTA CGTGGGCATT
GTTCGCACCC ACAAACGCTT AGAGCGCGCA ACTCATCGCA TTAAGCTTTT GCAAAAAGAA
ATTAACGATT ACTACTCTAA CTACAAAGTA AGTAACGATT TAATCGAACT GCGCAACCTC
GCCGTCGCTG CCGAGCTGAT TATTCGCTCA GCCATTCAAC GCAGAGAAAG CCGAGGACTA
CATTATTCCT TGGATTACCC CGAACTATCC CCCATCGCTC AAGATACCAT CCTCGTACCC
ATGAACTACG CGGCACAAAA CATTATTGTT CACGCCCCTA CACAATAA
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| Protein sequence | MKKAKPSRKT LAHPSQTHNV DVLVIGSGAA GLTLALNLAG HCKVAVLSKG NLRAGSTWYA
QGGIAAVLDN NDSVESHVKD TLVAGAGLCH EDAVDFTVRN SKSAIEWLIN LGVNFTRNED
SENYHLTREG GHSHRRIIHS ADATGKAVHT TLLESAQVAK GVELFENYIA LDLIRQPDPN
SKRLRCTGAY VFNRHQDRVE LFNAKAVVLA TGGASKVYLY TSNPDSATGD GIAMAWRAGC
RVANMEFNQF HPTCLYHPKA KTFLITEALR GEGAKLRLPD GSQFMHNFHS LGELAPRDVV
ARAIDHEMKR LGSDCLYLDI SHRTPEFIES HFPTVREKCL EFGIDITKEP IPVVPAAHYT
CGGVVVNNKG QTDLLNLYAI GETSFTGLHG ANRMASNSLL ECIVYARSAS ESILATLNNI
APPQASPQWD ESRVTNSDED VVISHNWDEL RRFMWDYVGI VRTHKRLERA THRIKLLQKE
INDYYSNYKV SNDLIELRNL AVAAELIIRS AIQRRESRGL HYSLDYPELS PIAQDTILVP
MNYAAQNIIV HAPTQ
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