| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2250 |
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| Symbol | |
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| ID | 3967926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2857694 |
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| End bp | 2858368 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921341 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_527722 |
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| Protein GI | 90021895 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3073] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000000471731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0806236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA GCCAAAAACA TAGCCTCAAC GAGTCCCTAT CAGCATTAGT TGATGGCGAA
AGCAATGAGT TGGATTTGCG TAGAGTGCTA AAGCAAAGCG CAGCCGACGA TGAGTTAAGA
GAAACTTGGC GTCGCTACCA GTTAATAGGT GCGGTAATGC GTAACGATAA AGATGTTGCG
CCTTCCATTG ATATTTCTGC CGGTGTAATG GCAGCTATCG CTGATGAGCC AGCCCCCAGT
GTGGCTAGCA CTAGTAAAGT TAAAACTTGG CTCGAGGGAA TGGGTAAAGC GAGTATTGCT
GCCGCCGTTG CGGTGGGGGT GCTTGTTGGT GTGCAACAGT TGCCCAGTGA GCAAACAGGC
GAAGAGCTTA TGGCGGGTAG CGATGCAGCA GTACCTGCAG CGGTTAATGC TAATGTGCCA
GATTGGTTTC AAAGTCAGCC TTTAAGTGCT CGCACAGTAA GTGGAGCAGG GGAAACTCAT
TCCGCGCCCG CAGCTTATGC TTCTTATCCT CGTGGCTCTG AGTTACCATC TGTAAATATC
TCGCGCTTGT CTAGTGATCC AGAGCTGGAA GCGTACTTAA ACAGAATGTT AGAGAAGCAC
GCCCAAAAAG CAGCGGCTGA AAATGGTATT AAAATGGTGC CCTTAGCCCG AGCGTCTTCC
GTAGAAGGGG AATAA
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| Protein sequence | MTESQKHSLN ESLSALVDGE SNELDLRRVL KQSAADDELR ETWRRYQLIG AVMRNDKDVA
PSIDISAGVM AAIADEPAPS VASTSKVKTW LEGMGKASIA AAVAVGVLVG VQQLPSEQTG
EELMAGSDAA VPAAVNANVP DWFQSQPLSA RTVSGAGETH SAPAAYASYP RGSELPSVNI
SRLSSDPELE AYLNRMLEKH AQKAAAENGI KMVPLARASS VEGE
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