| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2243 |
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| Symbol | |
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| ID | 3964847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2850509 |
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| End bp | 2851189 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921334 |
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| Product | RNAse III |
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| Protein accession | YP_527715 |
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| Protein GI | 90021888 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00670311 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACCAGA ATGATCGATT GGTAGCCCGA TTGGGCTACA CCTTCAAAGA TAAAAGTCTC
CTTAAGTTAG CTCTTTCTCA CAGAAGTTAT GGCAAACAAA ACAATGAACG CGTGGAGTTT
CTGGGCGATT CACTGCTAAA TTTTATTATT GCAGAAGCCT TGTTTGCTAA GTTTCCCACC
GCCAAAGAGG GGCAGCTTAC CCAGCTCCGC GCCAATCTTG TTAAAGGTGA AACTCTCGCC
GAAATAGCGC GTGAATTTGG TTTGGGTGAT TTTCTTCTGC TAGGAGAAGG GGAGCTTAAA
AGTGGTGGTT TTCGTCGAGC GTCCATTCTC GCCGATGCCG TAGAAGCCTT GATTGGTGCC
ATATACTTAG ATTCCAACAG CAGTATGCCT ACGTGCCGTG AGCGCGTGCT GGCATGGTAT
GCCACAAGAC TTGATAAAGT CGAGCTTAAA GCCACAGCCA AAGATGCTAA AACCCTTCTA
CAGGAATACC TACAAGAGCG CAAAATGCCG TTGCCAACCT ATACTGTACT AGCAGAGGGT
GGCGAAGCAC ACTCTCGCCA GTTTACAGTG GAGTGTACTA TTACGGGCAA ATCTAAGCCC
TGCAGTGCGG TGGGCAATAG CAAGCGAATT GCAGAAAAGC TTGCTGCCGA AAAAATGCTA
AGTCAGCTTA CAAATGCCTA G
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| Protein sequence | MNQNDRLVAR LGYTFKDKSL LKLALSHRSY GKQNNERVEF LGDSLLNFII AEALFAKFPT
AKEGQLTQLR ANLVKGETLA EIAREFGLGD FLLLGEGELK SGGFRRASIL ADAVEALIGA
IYLDSNSSMP TCRERVLAWY ATRLDKVELK ATAKDAKTLL QEYLQERKMP LPTYTVLAEG
GEAHSRQFTV ECTITGKSKP CSAVGNSKRI AEKLAAEKML SQLTNA
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