Gene Sde_2225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2225 
Symbol 
ID3964829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2828164 
End bp2829096 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content46% 
IMG OID637921316 
ProductC32 tRNA thiolase 
Protein accessionYP_527697 
Protein GI90021870 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.28353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG ATGTGCGCCG CAGCAAATTA GAGTTCAACA AACTACAAAA GCGTCTTCGC 
CGCAATGTGG GTAAGGCTAT TGCCGATTAC AACATGATTG AAGATGGCGA TAAGGTTATG
GTTTGCTTGT CTGGCGGGAA AGATTCATAC GCTATGCTCG ATATATTAAT GGGATTGCAG
AAAGCCGCGC CCATAAAGTT CGATATAGTG GCAGTAAATA TGGATCAAAA GCAGCCGGGC
TTTCCTGAGC ATATATTGCC CGAATACCTA GACTCGTTAG GTATCGAATA CCACATTGTT
GAGCGAGACA CCTATAGCGT TGTCAAATCG GTTATCCCTG AGGGTAAAAC TACCTGCGGC
CTGTGTTCTC GATTGCGCCG CGGCACGCTC TATGGCTTTG CAGAGCGTAT TGGCGCCACC
AAAATTGCAT TGGGCCACCA CCGCGACGAT ATTGTAGAAA CACTGTTTTT AAACATGTTT
TATGGCGGCA GATTAAAAGC CATGCCGCCC AAACTACTGG CGGACGATAA GCGCAATATT
ATTATTCGGC CGTTGGCATA CTGTGTAGAA GCCGATTTAG AAGAGTTTGC CAAACAAAAG
GCATTCCCTA TTATTCCTTG TAACCTATGT GGTTCGCAGG AAAACCTACA GCGCCAAGCT
ATTAAGCAAA TGCTGCAAGG CTGGGAAAAA CAGTTTCCGG GTAGAATTGA AACCATATTT
TCGTCATTGC AGCGGGTTTC GGCTTCTCAA TTGGCCGATA CAGAGCTTTA CGACTTTGTG
GGCCTAACAA TAGACAGAAG CGCAGAGCCA AAGGATTATG GCGAGCAGAG CGCTATAAAC
GTGTTTCCAC CATTAGACGA TAGCTTTGCT GGTAATAGTC TAAAAGGGGA GCAAGACCCA
GTTAAGCTAA TAGAGGCAGT TAATCTCGGT TAA
 
Protein sequence
MTQDVRRSKL EFNKLQKRLR RNVGKAIADY NMIEDGDKVM VCLSGGKDSY AMLDILMGLQ 
KAAPIKFDIV AVNMDQKQPG FPEHILPEYL DSLGIEYHIV ERDTYSVVKS VIPEGKTTCG
LCSRLRRGTL YGFAERIGAT KIALGHHRDD IVETLFLNMF YGGRLKAMPP KLLADDKRNI
IIRPLAYCVE ADLEEFAKQK AFPIIPCNLC GSQENLQRQA IKQMLQGWEK QFPGRIETIF
SSLQRVSASQ LADTELYDFV GLTIDRSAEP KDYGEQSAIN VFPPLDDSFA GNSLKGEQDP
VKLIEAVNLG