| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2205 |
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| Symbol | |
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| ID | 3965975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2807603 |
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| End bp | 2808559 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921295 |
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| Product | RelA/SpoT protein |
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| Protein accession | YP_527677 |
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| Protein GI | 90021850 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGG ACTCATCGAG CTTATTACCT CCAACACTTC CTTCTGCAGA TGTTTATACC
GATTTAAACA GTTTGCAGAA TATAAAAAAT ACCGAAAATA AAGATGAGGC GCTTAAAAAA
GTTGCGCAGC AGTTTGAATC CATCTTTGTG AATCAAATGC TAAAAAGTAT GCGTGAGGCC
AACGCAGTAT TTGAAGAAGA TAGCTTGTTT AACAGTCAAG AATCCAATTT CTATCGTGAT
ATGCACGATC AACAATTGGC ACTTACCCTT TCTCATGGTA GGGGAATGGG TGTAGCTGAT
GCGCTATATC GCCAGCTTTC CGGCCAAAAA TACGGAAACA CGGAGCGTGT AAACACCAGT
GTGGCAAGCT ATCAGGCATC ACCGGTAAAT GCAGTGACTA AGTATCACTC GCCAGATAAT
ATGAGTGCGG CTGCACCTAA AGGCGAACGC AGCGCTATGG CCACTTCGCC AGACGATTTT
ATTCAACAAA TGTTGCCCAA TGTAACTAAA GCGGCAGAAA AATTAGGCGT AGAGCCTGAA
GTACTTATTG CACAGGCTGC GCTTGAAACA GGTTGGGGTG AAAAAGTAAT TGCCGATAAA
AATGGCCAGC CCAGCAATAA TTTATTCAAT ATTAAAGCTC ATAATGGTTG GCAGGGTAAT
GCTGTAACCG CTGAAACCTT AGAGTTTGCT AATGGTAAAT TTGAAAAAGA AAAAGCAGCA
TTTAGGCAAT ATGGCAGCAT AGAAGAAAGT GTGAATGATT ACGTTAGTTT TATTCAGGGT
AACCCGCGTT ATCAAGATAT TGCCACTGGT AATAAAACAG CCGAAGAGTA TATTAAGGGT
ATAACCCAAG CGGGTTACGC CACAGACCCA GCTTATGCAA ACAAGGTTTT AAGCGTATTG
GAGCGCGTTG CAGATAAAGT AAAAGCGCTA TCTGGCAACA CCTCGGATAA CGGGTAG
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| Protein sequence | MKMDSSSLLP PTLPSADVYT DLNSLQNIKN TENKDEALKK VAQQFESIFV NQMLKSMREA
NAVFEEDSLF NSQESNFYRD MHDQQLALTL SHGRGMGVAD ALYRQLSGQK YGNTERVNTS
VASYQASPVN AVTKYHSPDN MSAAAPKGER SAMATSPDDF IQQMLPNVTK AAEKLGVEPE
VLIAQAALET GWGEKVIADK NGQPSNNLFN IKAHNGWQGN AVTAETLEFA NGKFEKEKAA
FRQYGSIEES VNDYVSFIQG NPRYQDIATG NKTAEEYIKG ITQAGYATDP AYANKVLSVL
ERVADKVKAL SGNTSDNG
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