Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2203 |
Symbol | |
ID | 3965973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2803220 |
End bp | 2804818 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921293 |
Product | flagellin-like protein |
Protein accession | YP_527675 |
Protein GI | 90021848 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTATAT CTTCGCTGCA AATATTTAAT ATCGCGAACA GTGGCATGGC TGATGCTAAT CAGGCCATGG TGAAGACGCA AGAGCAGCTC TCTACCGGCA AGCGTGTTTC AACGCCCTCG GATGATCCCG TAGCTTCCAC CAAAATTATT CAATTAACTG AAGAGTTGGC CAATATAAAT CAATATGGCA TTAATAGTGA CCTAGCCGAA AATAGCATTG TGTTACAAGA GTCTGCGCTT GAAGCGATAA ATAACTTAAT TGTCAGAATG CAGGAACTAG CCGTACAGGC GGGTAACAAC GCAACATTGG GGCCTACCGA GTACAAGGCG CTTGCTGCCG AAGTAGACAG TCGTTTAGAA GAGTTACAGA GCTTGCTAAA TACTAAAGGG CCTGGCGGTG ACTATATTTT TGGCGGTTAT CGTTCAACCA CAGAGCCATT TAGCGGAACT GCAAGTACTG GCTTTAGTTA TAATGGTGAT GAAGGGCAAA AATTTGTAAA AATAGCGAAC AATACTCATA TTGCCGCTAG TGATTCTGGC AAAAAAATAT TCGTTGATAT ACCAAGCGCA GAAAATACAG TGCGTACTTA CCCTAGTTCT AATAATCGCT CTTCTCCGCC AGTAGAGGTG TCTGTTGGTC AAGTATTTGA TCAAGAGGCT TACGACGAAT TCTATCCTGA AGATATTGTT ATTTCGTTTA ACCATGAAAG CACGGTGGTG CCGGCAGGAA AAAACTACAC GGCAACCGAG CGCTCGACCG GCAAAGTTAT TGTTGCTAAT CAGCCGTTTC GCTCTGGTGA ATTAATTGAG TTAAAGGGCG TACGCTTTGC TGTAGTGGGT GAACCAGCCT CTGGAACTGC AGCGCAAGCA GCTTTACTTA ATTTTGATGC AGACGGTGTC GACGCAAGAC CCATTGATTT TACTGCAACC CCAGAGACAT TCGACATAAC TGTTCGAGGA CGAAAAGAAA CACTGGTATT GGACGGCCCT ATTAACAGCG CTGCAGACCT ATCAACTGTA TTAAATTCTG CGGGTAACGG TAATGCTGCT GCCCTAGCTA GATTGGGCGT GGCGGTAGAT GCTACGGGGT TTAATATGCC AGCAGGGCTC CAAATTACGC TATCGAATGG TTCTGCAAAC ACTAACGCAG CGCTCGGTGT TACATCCGCT ACTCAGAGTG TATCCTCTGG CGGTGTGACA GCTGTTGCCG GTGACCGAAT ATTTATTGAA GCAACCAATA AACAAGATGT ACTTACAACT CTGGCGCAAA TGAGTGAATC GATGAAGACC TACGAGGGTG GCACCGAAGA TAGACGGTCT ATTGAAAAGG TGATTGCTTC CACACTTAAG AATCTATCTA ACGCACAAAC ATCTATATCG AATGTCACTT CTGAGCTTGG TGCCAGATAT AATACAATTG ATAGTACACG ATCACTTCAT TTAGACTCGG AAGTTGTTAT AAATAAATTT CTAGCAGACT TAAGAGATGT AGACTACGCC GAAGCAGCTA CGCGTTTAAG TGTCGAAACC CTTGTGTTAC AAGCTGCGCA GTCTTCTTTT GTGAGGGTTT CTCAGCTCAC GCTATTCTCG CAGTTATAG
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Protein sequence | MRISSLQIFN IANSGMADAN QAMVKTQEQL STGKRVSTPS DDPVASTKII QLTEELANIN QYGINSDLAE NSIVLQESAL EAINNLIVRM QELAVQAGNN ATLGPTEYKA LAAEVDSRLE ELQSLLNTKG PGGDYIFGGY RSTTEPFSGT ASTGFSYNGD EGQKFVKIAN NTHIAASDSG KKIFVDIPSA ENTVRTYPSS NNRSSPPVEV SVGQVFDQEA YDEFYPEDIV ISFNHESTVV PAGKNYTATE RSTGKVIVAN QPFRSGELIE LKGVRFAVVG EPASGTAAQA ALLNFDADGV DARPIDFTAT PETFDITVRG RKETLVLDGP INSAADLSTV LNSAGNGNAA ALARLGVAVD ATGFNMPAGL QITLSNGSAN TNAALGVTSA TQSVSSGGVT AVAGDRIFIE ATNKQDVLTT LAQMSESMKT YEGGTEDRRS IEKVIASTLK NLSNAQTSIS NVTSELGARY NTIDSTRSLH LDSEVVINKF LADLRDVDYA EAATRLSVET LVLQAAQSSF VRVSQLTLFS QL
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