Gene Sde_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2202 
Symbol 
ID3965972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2800877 
End bp2802619 
Gene Length1743 bp 
Protein Length580 aa 
Translation table11 
GC content45% 
IMG OID637921292 
Productadenylate kinase 
Protein accessionYP_527674 
Protein GI90021847 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAG TTATTAATAC AAACGTCGCA GCTTTAAATG CACAGCGACA ACTTGTGGCA 
TCCGGCAATG ATATGAGTGA AGCAATGGAA CGATTGTCAT CTGGTAAACG CATTAACACT
GCGCGAGATG ACGCTGCTGG CCTCGCTATA TCGAACCGAA TGACCTCTCA AATTCGTGGC
TTGGATCAAG CTGTTCGAAA TGCAAACGAC GGTGTCTCAA TGATACAAAC CGCAGAAGGT
GCTTTGGACG AAGTAACCAA TATTCTGCAG CGTATGCGAG AACTGTCGAT CCAGTCTGCT
AACGGAATTT ATTCCGATAC AGACAGAAGT ACTTTGGACG CTGAAGTACA ACAACTAAAA
GCAGAAGTGG ATCGCATTGC AAAATCTACT TCTTTCAACG GTCAACCTCT GCTGGATGGT
AGTTTAGGTA GTGTTTCTTT ACAGGTAGGT GCTGAAGCTA ACCAAACAAT CGCGTTAGAA
ATACCCGGGT TTAATACTTC TTCGTTAGGT GGAGCTTCTG GCGATATAGT GGGTGGAGAA
ACTGCAGCTG GGTTAACCAC TCTTGCACTG TTTGACACTG CAGATGCCGC CCATACGCTC
TATGTAAACG ATACTGCCAT TAGTGATTTA TCTAACGGAA CGACGTTAAA CGATAAATTG
GCGATTATAA ATGCTGACCT AGACGGTAAA GGTGCGACCG CTTCTTCTCT AGTTTCTGTT
GTGGGCACCA CCCCTGGCAA TGGTGTATTA ACAGCTGGAG TTAGCTCTCT TACTCTCGCG
TTGGTTGATG GCGATGGCAA CAGCCAAAGT TACGTAATAA CGGATACCAA TAGTCTTGAA
GACTTACGCG ATAAAATTAA CTCAGATACT ACATTGGATG CAAAGATAAA CGATGATGGT
AAGTTAGTTG TAAGTAAAGA TGATGGAACA TCAATTGCTG TTACGGATGC AAGTGGTGCT
TCTGGTCTTG CAACGGGCGT GACAACTAAT TTCTCATTGG TACTAACAGA TACCTCTGCG
GAAAAGAACG GTGTTAAGTT TGAAGTCGGC GCTGCTAACG GTGCCGATAT ACAAGCGTTA
GGGATCGATG TGCATGATGA CAATGGCAAT TTAACAGGTA CCACCGTCAC AAGTACATCT
ACCAACACTA TTCAAAAGGG CGATCTACTC ATTAACGGCG TGGCAATTCC AGCATTCACT
GAAACTGGCG TTGCAGCAAC AACGGTCGAT GAAGTAATAG AGGCGATTAA TTCTGTTTCT
GATGATACCG GTGTAGTCGC GTACGAAACG GGTGGTAACA CTGCGCAAAT AAGTCTGCGT
TCATCCACGG GCGACGAGAT ATCTATTGAG TATGGTGATA ATGCTACAGC AGCAAACGTA
CTTGCTGCTA CTGGTCTGCA AGAGCGTAAT GCTGCAGAGG GAGGTGGATC TGTATCGGGT
ATATCCATTG GTACAGCTGC TGGCGCACAG AAATCTATCG ATGTTATTGA TAAGGCGCTA
GAACAGATTA ACTCGACAAG GTCGCAATTA GGTGCGGTAA ATAACCGTTT AGATTTTACT
ATGTCGAATT TATCTAACGT AGCCGAAAAA ACATCCGCTG CTAAATCGCG AATTGTAGAT
GCCGACTTCG CCAAAGAAAC GTCCGAATTA AGTCGAGCGC AAGTGCTGCA GCAAGCGTCG
CAAGCAATGC TTGCTCAAGC GAATGCTCAG CCTCAACAGG TGCTGCAGTT ACTTCAGGGT
TAG
 
Protein sequence
MPLVINTNVA ALNAQRQLVA SGNDMSEAME RLSSGKRINT ARDDAAGLAI SNRMTSQIRG 
LDQAVRNAND GVSMIQTAEG ALDEVTNILQ RMRELSIQSA NGIYSDTDRS TLDAEVQQLK
AEVDRIAKST SFNGQPLLDG SLGSVSLQVG AEANQTIALE IPGFNTSSLG GASGDIVGGE
TAAGLTTLAL FDTADAAHTL YVNDTAISDL SNGTTLNDKL AIINADLDGK GATASSLVSV
VGTTPGNGVL TAGVSSLTLA LVDGDGNSQS YVITDTNSLE DLRDKINSDT TLDAKINDDG
KLVVSKDDGT SIAVTDASGA SGLATGVTTN FSLVLTDTSA EKNGVKFEVG AANGADIQAL
GIDVHDDNGN LTGTTVTSTS TNTIQKGDLL INGVAIPAFT ETGVAATTVD EVIEAINSVS
DDTGVVAYET GGNTAQISLR SSTGDEISIE YGDNATAANV LAATGLQERN AAEGGGSVSG
ISIGTAAGAQ KSIDVIDKAL EQINSTRSQL GAVNNRLDFT MSNLSNVAEK TSAAKSRIVD
ADFAKETSEL SRAQVLQQAS QAMLAQANAQ PQQVLQLLQG