Gene Sde_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2186 
Symbol 
ID3967570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2781634 
End bp2782683 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content46% 
IMG OID637921276 
Productflagellar biosynthesis/type III secretory pathway protein-like 
Protein accessionYP_527658 
Protein GI90021831 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA ACAAAAGCAA CACACATGCA CCGTTCGAGA TTATACGCCA AGAAGAGGGG 
GTAGAGTCTT GGGCGCCGCC CAGCATGACG GTACCTGGTC GTGTAGTACA AAGTGCAATT
AAAGAAAAAA AACGCGCTAA AAACGAATCT ATTGAAGATA TTCCCCCATC CAAACGACCA
CCGCCTCTAA CCGCTGATGC GCTTCAAAAA ATGGCTGCCG AGGCCAAAGA AGAGGGTTTT
GCCGAGGGTA GAGCAGAAGG TCTGCAATCG GGTCACACCG AGGGATATAA CAAAGGCTTC
GATGCTGGCA GTAAAAAAGC ATATCAAGAA ACATTAACCT CTATAGAAAA TGAGCGCGCG
CGCTTAGCGT CTATTGCCGA AGAATTGTTG TTGCCAATGC AAAAGCAACA ACAGGATCTA
GAGCAAATAG TGGTTGATAT TGCTGTGAAT ATGGCAAAAA AAATATTACA AGCCGAGATA
AGCACCGACC CTTCGCTGCT ATTTGCGCTT GTAAACCGAG CCATAAATGA GTTGCCGGTA
GGGGCAAAAA ATATACACGT TTCACTCAAC CAGCAAGATG CAGAGTTAAT GGCAGGTTTA
GCTGAAGAAA CTGCAGGAAT TAAAGAGTGG CCAGTCCATA TAGATAACTC TTTAACATCT
GGTGGTTGCC GCGTAACCAG CGATGAAAGC CTTATTGATT TTGATGTAAG TACGCGTATA
GCAAAGTATT TCGACGAGGC ACGCGAGAGC GTCGAGGCTG AAGACGACGA AGATTATCCC
CCAATGATCG AACGACCTGA GCCGATTGGT GATGGCAATA GAGGTTTAGC AAGCGATACT
GAGCTGGAAA GAGAAAAAGC AGAAGGGGAT GAATCAGAGT TGGATTTCGT GGAAGCTGAC
GGTCAGGCAG AGGACAGTAA AACAGAAGAC TCTGAAAGAG AAAGCAATAA AACAGATAGA
GAAGCAGAGG CGGGTGAGGC GAGGCAAGCG TCTAAAGCGG GTAGTAGTCC TTTAAAGTCT
GAAGAAGAGC CAAGCGATGA CCAGGCATGA
 
Protein sequence
MADNKSNTHA PFEIIRQEEG VESWAPPSMT VPGRVVQSAI KEKKRAKNES IEDIPPSKRP 
PPLTADALQK MAAEAKEEGF AEGRAEGLQS GHTEGYNKGF DAGSKKAYQE TLTSIENERA
RLASIAEELL LPMQKQQQDL EQIVVDIAVN MAKKILQAEI STDPSLLFAL VNRAINELPV
GAKNIHVSLN QQDAELMAGL AEETAGIKEW PVHIDNSLTS GGCRVTSDES LIDFDVSTRI
AKYFDEARES VEAEDDEDYP PMIERPEPIG DGNRGLASDT ELEREKAEGD ESELDFVEAD
GQAEDSKTED SERESNKTDR EAEAGEARQA SKAGSSPLKS EEEPSDDQA