| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2170 |
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| Symbol | |
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| ID | 3967554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2765364 |
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| End bp | 2766149 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637921260 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_527642 |
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| Protein GI | 90021815 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCCAC TGCTTTTTAC CGAGCAAGAC TTAGGCTTGC TTTTACAGCA GTATTTTTTA
CCTTTTTGCC GTATTGGCGC TATGTTTTTG GCTATGCCTA TTCTGGGGTC GCAGTTGGTA
TCGCCACGTG TGCGCCTAGG TTTAGCCTTT ATTGTTACCC TTATGGTTGT GCCCATGCTG
GGTAGTATTC CCAAAGTTAG CGGGCTATCT GTTCAAACAT TTATTTATAT TTCACAAGAG
ATTTTATTGG GGTTAGCTGC AGGCTACTGT TTTCAGGTGG CGTTTCAGGT GTTTGTATTG
GCGGGCCAGC TTATAGCAAT GAAAATGGGC CTGGGCTTTG CCTCTATGAA CGACCCCGTA
AACGGCGTGC AAACCACGGC CATTTCGCAG TTTTATTTAA TGCTTGTTAC GTTAATGTTT
GTATCTGTAA ATGGGCATTT GGTAATGATC AATATGTTGG TAGAAAGCTT TGTTACTTTC
CCGCCTGGCG GCTTTATTTT TTCAACCAAC ACTATGTGGA AAATTGCCAA TGTAGGCACT
TGGCTATTCG CAGCAGGCTT GCTAATGGCG TTGCCGGTTT TAACTGCCTT GCTGTTTATA
AATATTGCTT TCGGCATAAT GAGCCGAGCA GCGCCACAGC TAAATATATT TGCTATTGGT
TTTCCATTCA CCTTGTTGTG CGGTTTGTTA ATGATATGGC TGGGGCTGGT TACTTTCGAT
TCTAATTTTG AAAGCGTTAT GGATGACGGT TTTATTCTTT TACACCAAGT TCTGCATCAG
AAATAA
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| Protein sequence | MMPLLFTEQD LGLLLQQYFL PFCRIGAMFL AMPILGSQLV SPRVRLGLAF IVTLMVVPML
GSIPKVSGLS VQTFIYISQE ILLGLAAGYC FQVAFQVFVL AGQLIAMKMG LGFASMNDPV
NGVQTTAISQ FYLMLVTLMF VSVNGHLVMI NMLVESFVTF PPGGFIFSTN TMWKIANVGT
WLFAAGLLMA LPVLTALLFI NIAFGIMSRA APQLNIFAIG FPFTLLCGLL MIWLGLVTFD
SNFESVMDDG FILLHQVLHQ K
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