Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2155 |
Symbol | |
ID | 3967539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2747606 |
End bp | 2748091 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637921245 |
Product | flagellar FliF M-ring protein |
Protein accession | YP_527627 |
Protein GI | 90021800 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCTA ATTTAAGTAA AAACAATATC AGTGAAGATC CGGTCCTGCA GTGGGTTACC TTCAAACTAG CTGGTGAAAC CTATGGTGTA AATGTAATGC AGGTACAAGA GGTGCTGCGT TACTCAGAAA TTGCCCCTGT ACCAGGTGCC CCAACGTATG TGATAGGCAT AATTAACCTT CGTGGCAACG TGGTTACTGT AATTGATACC CGCCAGCGCT TTGGTTTAAC CGATGGCGAA GTCACTGACA ATACGCGCAT TGTCATTATC GAAGCAGAAA AGCATGTAGT GGGCATTATG GTAGATAGCG TGGCAGAGGT TGTTTACCTG CGCCAATCAG AAATAGAAAC CGCCCCTAAT GTGGGGAATG AAGAAAGCGC GAAATTTATT CAAGGTGTAT GTCATAAAAA CGAAGAGCTG CTTATTCTAA TTGAATTAGA TAAGTTGCTA ACCGATGACG AGTGGGCTGA AATAGACGAA ATCTAG
|
Protein sequence | MAANLSKNNI SEDPVLQWVT FKLAGETYGV NVMQVQEVLR YSEIAPVPGA PTYVIGIINL RGNVVTVIDT RQRFGLTDGE VTDNTRIVII EAEKHVVGIM VDSVAEVVYL RQSEIETAPN VGNEESAKFI QGVCHKNEEL LILIELDKLL TDDEWAEIDE I
|
| |