Gene Sde_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2155 
Symbol 
ID3967539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2747606 
End bp2748091 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID637921245 
Productflagellar FliF M-ring protein 
Protein accessionYP_527627 
Protein GI90021800 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTA ATTTAAGTAA AAACAATATC AGTGAAGATC CGGTCCTGCA GTGGGTTACC 
TTCAAACTAG CTGGTGAAAC CTATGGTGTA AATGTAATGC AGGTACAAGA GGTGCTGCGT
TACTCAGAAA TTGCCCCTGT ACCAGGTGCC CCAACGTATG TGATAGGCAT AATTAACCTT
CGTGGCAACG TGGTTACTGT AATTGATACC CGCCAGCGCT TTGGTTTAAC CGATGGCGAA
GTCACTGACA ATACGCGCAT TGTCATTATC GAAGCAGAAA AGCATGTAGT GGGCATTATG
GTAGATAGCG TGGCAGAGGT TGTTTACCTG CGCCAATCAG AAATAGAAAC CGCCCCTAAT
GTGGGGAATG AAGAAAGCGC GAAATTTATT CAAGGTGTAT GTCATAAAAA CGAAGAGCTG
CTTATTCTAA TTGAATTAGA TAAGTTGCTA ACCGATGACG AGTGGGCTGA AATAGACGAA
ATCTAG
 
Protein sequence
MAANLSKNNI SEDPVLQWVT FKLAGETYGV NVMQVQEVLR YSEIAPVPGA PTYVIGIINL 
RGNVVTVIDT RQRFGLTDGE VTDNTRIVII EAEKHVVGIM VDSVAEVVYL RQSEIETAPN
VGNEESAKFI QGVCHKNEEL LILIELDKLL TDDEWAEIDE I