| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2134 |
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| Symbol | |
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| ID | 3967518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2724273 |
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| End bp | 2725667 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921224 |
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| Product | mannose-1-phosphate guanylyltransferase (GDP) |
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| Protein accession | YP_527606 |
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| Protein GI | 90021779 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
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| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000409972 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACG TGGTTCCAGT AATACTTTCT GGTGGCAGTG GCTCGCGCCT TTGGCCTAAA
TCCCGTAAGG CTTACCCCAA GCAATTACAC CGCCTGTATG GCGACGCAAC CATGTTGCAG
CACACAGTAA AACGCGTAGA TCATCTTGGC GCGCCAATCG TTGTGTGCAA TAACGACCAG
CGTTTTATGG TGGCAGATCA GCTACAAGAA ACCTGCGGCG ATGCCTCTCA AATAATCCTC
GAGCCAATAG GCAGAAATAC CGCGCCAGCC ATTGCTGTGG CGGCTATGCG TGCCGTACAG
CAAGTGGGCG ACAACGCCAT AATTGTAATA CTGGCGGCGG ACCACCTAAT TAAAGATATG
CCAGGCTTTA GGGCTACCTT AGACATAGCC ATTAAAAAAG CAACAGAGGG TAAGCTAGTA
ACCTTTGGCG TAGTGCCCAC CCACCCAGAA ACAGGTTACG GCTACATAAA AGCCGCAGAG
CCATTGGCGG GTAATACGCA AGGCGCAACA GTTGCCGAAT TTGTAGAAAA ACCAAACCTA
GAAACCGCAC AAAAATATTT AGCCGAAGGT TCCTATACAT GGAACAGTGG CATGTTTGTT
TTCCCAGCCA AAACGCTATT AGAAGAATTA ACGCGCCTAA ATGCCGAATT AGTGAAGCAA
AGCCAAATTT CTTTAGATAA ATCTGAACAA GATTTAGATT TTATACGACT AAACGAACAA
GCTTTTGCCC AGTGCCAAGA TATATCAATA GATAACGCTT TAATGGAGCA CACCAATAAA
GCTTGGGTGG TGCCGTTAAA CGCAGGCTGG AGTGATTTGG GTAGCTGGCA ATCTCTTTGG
GAAAGCAGCG ACAAAGACGA GTACGGTAAC GTAGTGGTAG GTGATGCCTA CATGCGAAAT
TGCACGAACT CACTTATCCA TTCCGATGGT AGGTTGGTAG CCGCAATCGG TTTAGATGAC
GTAGTTATCA TAGATAGTGA CGACGCGTTA TTAGTAGTAA ACAAAAATAA AACGCAAGAT
GTAAAGCACG TAGTGGATTG GCTAAAAGCG AATAATAGAA GCGAAAGCCA ACACCACCGC
GAAGTGCATC GACCATGGGG CAGCTACGAC TCTATAGATA GTGGCGAAAG GTACGATGTA
AAAAGCCTAA AAGTAAAACC GGGCGCAAGT TTGTCGCTGC AAATGCATCA CCACCGCGCA
GAGCATTGGG TGGTTGTGCG TGGCACAGCA CAGGTAGAGC GCGGCGACGA AAAATTCTTA
GTAACAGAAA ACGAATCGGT TTATATACCG TTAGGCGAGC CGCATAGGCT TACCAACCCT
GGCAAAGTAC CCTTGTATTT GGTAGAGGTG CGTAGCGGGG AATATTTGGG GGAGGACGAT
ATCGTTCGGC TTTAA
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| Protein sequence | MENVVPVILS GGSGSRLWPK SRKAYPKQLH RLYGDATMLQ HTVKRVDHLG APIVVCNNDQ
RFMVADQLQE TCGDASQIIL EPIGRNTAPA IAVAAMRAVQ QVGDNAIIVI LAADHLIKDM
PGFRATLDIA IKKATEGKLV TFGVVPTHPE TGYGYIKAAE PLAGNTQGAT VAEFVEKPNL
ETAQKYLAEG SYTWNSGMFV FPAKTLLEEL TRLNAELVKQ SQISLDKSEQ DLDFIRLNEQ
AFAQCQDISI DNALMEHTNK AWVVPLNAGW SDLGSWQSLW ESSDKDEYGN VVVGDAYMRN
CTNSLIHSDG RLVAAIGLDD VVIIDSDDAL LVVNKNKTQD VKHVVDWLKA NNRSESQHHR
EVHRPWGSYD SIDSGERYDV KSLKVKPGAS LSLQMHHHRA EHWVVVRGTA QVERGDEKFL
VTENESVYIP LGEPHRLTNP GKVPLYLVEV RSGEYLGEDD IVRL
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