| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2115 |
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| Symbol | |
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| ID | 3967499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2703010 |
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| End bp | 2704176 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921205 |
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| Product | DNA gyrase, subunit A |
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| Protein accession | YP_527587 |
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| Protein GI | 90021760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.539484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG TTGTTGTAGG CACAGGCTAT GTAGGTATGT CTAATGCCGT TTTGTTAGCC
CAAAAATACC CCGTTGTGGC CTTGGATGTG GTGCCAGAGC GTGTGGAAAT GGTTAATTCC
AAGCTTTCGC CTATTCAGGA TGTGGAAATC GAGGACTTTT TAGCACATAA GCCACTCAAC
CTGGTAGCTA CTTTAGATAA AGCCGCTGCC TATGAAGGCG CAGATTTTGT AGTTATTGCT
ACGCCAACAG ATTACGACCC AGAAACAAAC TACTTTAATA CCAATACTGT AGAGTCGGTA
ATTAAAGATG TAATGACCCA TAACCCTAGT GCGGTTATGG TTATTAAATC TACTGTGCCA
GTGGGTTACA CCGTGGATGT GCGTGCGCGT TTTGGTACGC CTAACGTTAT ATTCTCGCCC
GAGTTCTTGC GTGAGGGCCG TGCGTTATAC GATAACCTTC ACCCATCGCG TATTATTGTT
GGTGAGCGGT CTGAGCGTGC TGCCAAGTTT GCCGAATTGT TGCAAAGCTG TGCTATTAAA
CAAGATGTAG AAGTTCTGTT TACCGATAGC ACAGAGGCAG AGGCCATTAA ATTGTTCTCT
AACACTTATT TGGCTATGCG CGTAGCGTAC TTTAACGAGC TAGATACCTA TGCAGAAACC
CATGGGTTAG ACTCTAAGCA AATTATTGAA GGGGTAGCGT TAGACCCACG TATAGGTAAG
CACTATAACA ACCCTTCCTT TGGTTATGGT GGTTACTGTT TACCTAAAGA TACCAAGCAA
CTACTGGCTA ACTACGCCGA CGTACCAAAT AACCTAATTC GCGCTATTGT GGATGCCAAC
ACCACCCGCA AAGACTTTAT CGCCGATTCT ATAATCAAGA AAAACCCAGA GGTAGTAGGG
GTGTATCGTT TGATTATGAA AACCGGGTCC GATAACTTCC GTGCCTCTGC TATTCAGGGC
ATTATGAAGC GTATTAAAGC TAAGGGTATT CGTGTTGTGG TATTCGAGCC GGTGCTAGAA
GAAGAAACAT TCTTCGGCTC GGATGTAATA GCCGATTTTG ATGAGTTTAA AGCTTTAAGT
AGCGTTATTC TTGCCAACCG CATGGTGGAA GAGCTAGCCG ACGTGCGCGA TAAAGTGTAC
ACGCGCGACC TATTTAACAA CGATTAG
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| Protein sequence | MKIVVVGTGY VGMSNAVLLA QKYPVVALDV VPERVEMVNS KLSPIQDVEI EDFLAHKPLN
LVATLDKAAA YEGADFVVIA TPTDYDPETN YFNTNTVESV IKDVMTHNPS AVMVIKSTVP
VGYTVDVRAR FGTPNVIFSP EFLREGRALY DNLHPSRIIV GERSERAAKF AELLQSCAIK
QDVEVLFTDS TEAEAIKLFS NTYLAMRVAY FNELDTYAET HGLDSKQIIE GVALDPRIGK
HYNNPSFGYG GYCLPKDTKQ LLANYADVPN NLIRAIVDAN TTRKDFIADS IIKKNPEVVG
VYRLIMKTGS DNFRASAIQG IMKRIKAKGI RVVVFEPVLE EETFFGSDVI ADFDEFKALS
SVILANRMVE ELADVRDKVY TRDLFNND
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