| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2111 |
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| Symbol | |
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| ID | 3967495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2697581 |
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| End bp | 2698945 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921201 |
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| Product | citrate synthase |
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| Protein accession | YP_527583 |
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| Protein GI | 90021756 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000226419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.855626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG TAATTTCTTA CAATTTATTC ATTTTGTTAC AGGAGTCCGT AATGACTGAT
AAGAAAGCAA CCCTTACGGT CGACGGTTTG GACGATTCCA TTGAGCTGCC CGTATACTCC
GGCAGCGTCG GGCCAGACGT AATTGACGTT CGAGCCCTTA CCGGCAAAGG TTATTTCACC
TACGACCCCG GTTTCGTATC TACCGCTTCT TGTGAATCGA AGATCACATA TATTGATGGC
GACAAAGGTG TATTAATGCA CCGTGGTTAC CCCATCGAAA CTCTCGCGGA AAAATCAGAC
TACTTAGAGA CGTGCTATTT ACTTTTGCAC GGAGAACTTC CTTCCGCAGC AGAATACGAA
GAATTTAAAG GCATAATCAC ACACCACACT ATGGTGCATG AGTCTATCGC CCGCTTCTTC
CGTGGTTTCC ACTACGATTC ACACCCAATG GCGATGATGT GCGGAATAGT GGGTGCTTTA
TCCGCTTTCT ATCACGATTC ATTAGACATC TCTAACCCAG AGCACCGCTT AATCTCGGCG
CACCGTCTAA TAGCCAAAAT GCCTACCTTA GCGGCCATGT GCTACAAGCA CTCGCAAGGC
CAACCTTTCA TGTACCCAGA CAACAACTTG GGCTACGCAG AAAACTTCCT GCACATGATG
TTTGGCACTC CTTGTGACGA CCCTAAAGTA AACCCTGTTA TTGCTCGCGC AATGGATCGC
ATCTTCTTAT TGCATGCCGA TCACGAGCAA AACGCGTCTA CTTCTACCGT TCGCTTGGCA
GGCTCTTCTG GTGCTAACCC GTTTGCTTGT ATCGCTGCTG GTATCGCAAC CCTTTGGGGC
CCTGCGCACG GTGGTGCTAA CGAAGCCGTA CTTAGCATGC TAGAAGAAAT TGGCGACGAG
AAAAACATCG ACGCTTACGT AGCAAAAGCG AAAGACAAAA ACGATCCATT CCGCCTAATG
GGCTTTGGTC ACCGCGTTTA CAAAAACTTT GACCCACGCG CCAAAGTTAT GAAAGAAACC
TGTGACGAAG TATTAACCGA ATTAGGTTTA GAAAACGATC CGTTGCTTAA AATTGCTAAG
CGCCTAGAGC AAATTGCATT AGAAGACGAG TACTTCATCC AGAAGAAACT CTACCCTAAC
GTAGACTTCT ACTCAGGCAT CATCATGAAG GCTATTGGTA TTCCAACAGA TATGTTCACT
GTTATTTTCG CAACAGGTCG TACTGTAGGC TGGATTGCTC ACTGGCACGA AATGATCTCG
GAAGGCTTTA AAATTGGTCG TCCGCGTCAG CTTTATACTG GCTCTGTATT ACGCGAATTT
GAAGAGCGTG ATTCGCGCCC AAAGGCTAAT CCGGCCAAAT TCTAA
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| Protein sequence | MADVISYNLF ILLQESVMTD KKATLTVDGL DDSIELPVYS GSVGPDVIDV RALTGKGYFT
YDPGFVSTAS CESKITYIDG DKGVLMHRGY PIETLAEKSD YLETCYLLLH GELPSAAEYE
EFKGIITHHT MVHESIARFF RGFHYDSHPM AMMCGIVGAL SAFYHDSLDI SNPEHRLISA
HRLIAKMPTL AAMCYKHSQG QPFMYPDNNL GYAENFLHMM FGTPCDDPKV NPVIARAMDR
IFLLHADHEQ NASTSTVRLA GSSGANPFAC IAAGIATLWG PAHGGANEAV LSMLEEIGDE
KNIDAYVAKA KDKNDPFRLM GFGHRVYKNF DPRAKVMKET CDEVLTELGL ENDPLLKIAK
RLEQIALEDE YFIQKKLYPN VDFYSGIIMK AIGIPTDMFT VIFATGRTVG WIAHWHEMIS
EGFKIGRPRQ LYTGSVLREF EERDSRPKAN PAKF
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