Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2104 |
Symbol | |
ID | 3967488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2687899 |
End bp | 2689353 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921194 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_527576 |
Protein GI | 90021749 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.108932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACA AATATGACGT TATCGTTATT GGTTCTGGTC CTGCGGGCTA CGTGGCAGCT ATTCGCTGTG CGCAATTGGG TTTGAAAACA GCCTGTATTG AAAAATGGAA AGATAAAGAC GGCAAGGGTG TGAACGGCGG TACTTGTCTA AACGTAGGTT GTATACCTTC AAAAGCGTTG TTGGATAGCT CTCATCGCTA CGAAGATGCG CACAAAGGTT TTGCATCTCA CGGTATTAAA GCGCCTAACG TTGAAATTGA CGTGCCTTCA ATGATTGCAC GTAAAGATAA AATTGTTAAG CAGATGTCTG GCGGTATTAC TGGTTTGTTC CAAGCTAACA AAGTTACTTC TTTGTACGGA ACAGGTAAAT TACTTGCTGG CCGCAAAGTG CAATACGTTG CATTAGACGG TAAAGAAGAA GTGTTAGAAG CAGAGAACGT AATTCTTGCT TCTGGTTCTA TCCCTGTAAA CATTCCTGTT GCACCAGCAG ATGGCGATGT AATTGTTGAT TCAACTGGCG CATTGGAATT CCAAGCTGTA CCTGAGCGTT TAGGTGTAAT TGGTGCTGGT GTAATTGGTC TTGAGCTAGG TAGTGTTTGG GGTCGTTTGG GCTCTAAAGT GGTTTGTTTA GAAGCCATGG ATAGTTTCTT GGCTATGATG GATCAGCAGA TTGCTACCGA AGCGAAGAAA ATTTTGGTTA AACAAGGTTT AGATATCCGT CTAAGCTGTC GTGTAACTGG CACCGAAGTT GTAGAAGCTA AGGGCAAAAA AGAAGTTATC GTTACTTACA CCGATAAAGA CGGCAACGAA GCGAAAGAAA CTTTCGATAA GTTGATTGTT TGTGTTGGTC GTCGTCCGTT CACTGACGGC TTGTTGTCTG AAGACAGCGG CGTTAAGTTG GATGAGCGCG GTTCTATTTA CGTTAACGAT TTGTGCTCTA CTAGCGCGCC AGGCGTTTGG GCTGTTGGTG ACGTTGTACG TGGCCCAATG TTGGCTCACA AAGGTTCTGA AGAAGGTGTG ATGGTTGCAG AGCGCATTGC TGGCCAAAAA ACCGTAATGA ACTACGACAT TATTCCTAAC GTAATTTATA CCCACCCAGA AATTGCTTCA GTTGGTAAAA CTGAAGAGCA ATTAAAAGCA GATGGCGAAG CTTACGAAGT AGGTACTTTC CCATTCTTGG CAATTGGTCG CGCTGTTGCA GCCGATTGCG CAGAAGGTAT GGTTAAAATG ATTGCTCACG CTGATACCGA TCGCGTATTG GGTTGTCACA TTGTTGGCCC GAACGCGGCA GACCTTGTAC AGCAAGTAGC AATTGCTATG GAGTTTGGCG CTACATCAGA AGATATTGGT ATGACTGTAT TCGGTCACCC AACTTTCTCT GAAGCTGTTA AAGAAGCTGC GTTAGCGGTA CATGGTCATG CTATCCACAT GCCTAACCGT AAAAAACGCA AGTAG
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Protein sequence | MSNKYDVIVI GSGPAGYVAA IRCAQLGLKT ACIEKWKDKD GKGVNGGTCL NVGCIPSKAL LDSSHRYEDA HKGFASHGIK APNVEIDVPS MIARKDKIVK QMSGGITGLF QANKVTSLYG TGKLLAGRKV QYVALDGKEE VLEAENVILA SGSIPVNIPV APADGDVIVD STGALEFQAV PERLGVIGAG VIGLELGSVW GRLGSKVVCL EAMDSFLAMM DQQIATEAKK ILVKQGLDIR LSCRVTGTEV VEAKGKKEVI VTYTDKDGNE AKETFDKLIV CVGRRPFTDG LLSEDSGVKL DERGSIYVND LCSTSAPGVW AVGDVVRGPM LAHKGSEEGV MVAERIAGQK TVMNYDIIPN VIYTHPEIAS VGKTEEQLKA DGEAYEVGTF PFLAIGRAVA ADCAEGMVKM IAHADTDRVL GCHIVGPNAA DLVQQVAIAM EFGATSEDIG MTVFGHPTFS EAVKEAALAV HGHAIHMPNR KKRK
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