| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2084 |
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| Symbol | |
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| ID | 3967468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2667749 |
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| End bp | 2668822 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921174 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_527556 |
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| Protein GI | 90021729 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.157532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTAAAA AAATTGTATT GTTGCCGGGT GATGGCATTG GGCCAGAAAT TGTTGCCGAA
GCTAAAAAAG TGCTTGAAGC GGTTGATGCT AAATTCAAGC TTGGTTTGAA GTTTGAAGAA
GATTTGATTG GTGGATGTGC AATAGATGTA CACGGTGTGC CCCTGGCTCA ATCCACGTTG
GATCGCTGTA AAGCGGCTGA CGCGGTACTT ATGGGGTCTG TAGGCGGGCC TAAGTGGGAC
GCGCTAGATT CTAATATTCG TCCAGAAAAA GGCTTGCTAA AAATTCGCTA TGAAATGGGT
TTGTACGCTA ACTTGCGTCC TGCCATTTTG TATCCGCAAT TGGCCGATGC TTCATCACTT
AAGCCAGAGA TCGTATCAGG TTTGGATATT CTCATTGTGC GTGAGTTAAC TGGCGGTATT
TATTTTGGTG AGCCGCGCGG TATTCGCTTG TTGGATAACG GTGAGCGCCA AGGTTACAAC
ACTTACGTAT ACGCCGAGCA TGAAATTGAG CGTATAGGTC GTACTGCCTT CGAAATGGCG
ATGAAGCGCG ATAAGAAAGT GTGTTCTGTC GATAAGGCGA ACGTGCTAGA GGCAACTGTG
CTTTGGCGCG AAGTTATACA GTCTATATCC AAAGACTACC CGGAAGTCGA ATTGAGCCAC
ATGTACGTAG ATAATGCTGC AATGCAATTG GTGCGCGCAC CTAAGCAGTT TGATGTGGTG
GTAACTGGCA ATATGTTCGG CGATATTTTG TCTGATACTG CCGCCATGTT GACTGGGTCG
ATTGGTATGC TGCCGTCTGC GTCCCTAAAT CAAGATAGTA AAGGTTTATA TGAGCCTGTG
CACGGCTCGG CACCTGATAT AGCTGGGCAG GGTGTTGCTA ACCCGCTTGC GACAATTTTG
TCAGCCGCCA TGATGCTTCG CTACTCGCTA AACGAAGCGG CAGCAGCCGA TGCGATAGAA
GCGGCTGTTG GTGCGGTGCT GGATGATGGT TTGCGTTCGG CTGATATCTT CTCCGAGGGT
ATGAAAAAGG TTTCCACTCA AGAAATGGGT GATGCGGTTG CCGCGAAAAT ATAA
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| Protein sequence | MSKKIVLLPG DGIGPEIVAE AKKVLEAVDA KFKLGLKFEE DLIGGCAIDV HGVPLAQSTL
DRCKAADAVL MGSVGGPKWD ALDSNIRPEK GLLKIRYEMG LYANLRPAIL YPQLADASSL
KPEIVSGLDI LIVRELTGGI YFGEPRGIRL LDNGERQGYN TYVYAEHEIE RIGRTAFEMA
MKRDKKVCSV DKANVLEATV LWREVIQSIS KDYPEVELSH MYVDNAAMQL VRAPKQFDVV
VTGNMFGDIL SDTAAMLTGS IGMLPSASLN QDSKGLYEPV HGSAPDIAGQ GVANPLATIL
SAAMMLRYSL NEAAAADAIE AAVGAVLDDG LRSADIFSEG MKKVSTQEMG DAVAAKI
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