| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2079 |
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| Symbol | |
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| ID | 3967463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2659213 |
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| End bp | 2660424 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921169 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_527551 |
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| Protein GI | 90021724 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTA AGGTCGATTA TAGTGCTGTA CCTGATGTAA ACGGGCACTT TGGCCCCTAC
GGTGGTCGAT TTGTTTCCGA AACCTTGATG CATGCGTTGG ATGAGCTTGA AGAAATATAC
ACGCGTGTTA AAAACGACCC CAGCTTCCAA GACGAGTTTG ATCAAGATTT AGCTCATTAT
GTTGGTCGAC CATCGCCTTT ATACTTCGCC AAGCGCTGGA CAGACAAAGT GGGCGGTGCA
AAGCTTTATT TAAAGCGCGA AGATTTGAAC CACACCGGCG CTCACAAAGT AAACAATACT
ATTGGCCAAG CACTATTAGC CAAGTATACG GGTAAAACCC GTGTTATTGC TGAAACCGGC
GCTGGCCAAC ACGGCGTTGC GACCGCCACT GTTGCTGCGC GCTTAGGTTT AGAGTGTGTG
GTTTATATGG GTGCCGAAGA TGTTCAGCGG CAAGCGTTGA ATGTATACCG CATGAAATTA
CTCGGCGCTA AGGTTGTGCC GGTAACCTCT GGTTCGCGGA CCTTAAAAGA TGCCATGAAC
GAAGCCATGC GTGATTGGGT AACTAACGTC GATAATACTT TTTATATTAT CGGTACTGTT
GCTGGCCCTC ATCCTTACCC GCAGTTAGTG CGTGATTTTC AGTGTGTAAT TGGCCGCGAG
GCTAGAAAGC AATGCTTAGA GCAAACAGGT AATTTGCCAG ATGCCTTGGT AGCTTGTGTT
GGCGGTGGCT CGAATGCGAT TGGTTTATTC CACCCATTCT TAGAAGATGA AACTGTAAAA
ATGTACGGCG TAGAAGCTGG TGGTGATGGC GTAGAAACTG GTCGCCACGC TGCACCATTA
AATGACGGTA TTCCGGGTAT CTTACACGGT AATCGCACCT ACCTAATGGA AGATGAGAAC
GGGCAAATAA TTGAAACCCA TTCAATTTCT GCTGGTTTAG ATTACCCTGG TGTTGGCCCA
GAGCATTCAT GGTTAAAAGA CATAGGCCGC GTAGATTATG TGCCTATTAA TGACGATGAA
GCCATGGCGG CTTTTAGAAA CTTAACTCTC GTTGAGGGTA TTATGCCTGC GCTAGAGTCT
AGTCATGCTA TTGCCTACGC AGAAAAACTA GCCAAAACCA TGAGCGAAGA CAAAGTGATA
ATTGTTAATC TGTCTGGTCG TGGAGATAAA GACATTCTTA CTGTCGCAAA AATGGATGGC
ATTAGCGTTT AA
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| Protein sequence | MSSKVDYSAV PDVNGHFGPY GGRFVSETLM HALDELEEIY TRVKNDPSFQ DEFDQDLAHY
VGRPSPLYFA KRWTDKVGGA KLYLKREDLN HTGAHKVNNT IGQALLAKYT GKTRVIAETG
AGQHGVATAT VAARLGLECV VYMGAEDVQR QALNVYRMKL LGAKVVPVTS GSRTLKDAMN
EAMRDWVTNV DNTFYIIGTV AGPHPYPQLV RDFQCVIGRE ARKQCLEQTG NLPDALVACV
GGGSNAIGLF HPFLEDETVK MYGVEAGGDG VETGRHAAPL NDGIPGILHG NRTYLMEDEN
GQIIETHSIS AGLDYPGVGP EHSWLKDIGR VDYVPINDDE AMAAFRNLTL VEGIMPALES
SHAIAYAEKL AKTMSEDKVI IVNLSGRGDK DILTVAKMDG ISV
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