| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2053 |
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| Symbol | uvrC |
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| ID | 3967437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2632491 |
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| End bp | 2634329 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921143 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_527525 |
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| Protein GI | 90021698 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.747011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGC ACCAACCCCC TCCAGTATTT GATTCTACAA GTTTTCTAAA AAACGTAACA
AAATTGCCCG GCGTCTACCA AATGTACGAC GCGGATGGGG CGATTTTGTA CGTTGGTAAG
GCCAAAAACC TCAAAAACAG GCTTAGTAGC TATTTTAGGG CAACAGGCCT TACCCCCAAA
ACGCACGCTT TAGTAAAGCG TATTCAGGCC ATAGAGGTAA CGGTTACGCC TAGTGAGGCA
GAGGCGCTGG TACTTGAGCA CAACCTAATC AAATCGCAGA AGCCGCCGTT TAATATTCTG
CTGCGCGATG ACAAGTCCTT CCCCTATATC TTTATCTCAG AAGGGGAGCC ATACCCAAAG
TTGGCTTTTC ACCGTGGTCC CAAAAAGAAA AAAGGCCAGT ATTTTGGCCC ATTCCCGAAT
GCATCTGCTG TAAAAGAAAC GCTTAACTTC TTGCAGCGCA CGTTCCGCGT AAGGCAGTGT
GAAGACTCTG TATTTAGAAG CCGAACGCGG CCCTGCTTGC AGTACCAAAT AGGGCGCTGC
ACAGGCCCGT GTGTAGAGGC CATAAGCGTA GAAGATTACG CGGTAGATCT TGCTCACACC
GCCATGTTTT TAGACGGTAA AAGCGAGGTT TTGCAGCAAG AGCTGCAAGT TGAGATGGAA
CAAGCCTCGC AGGCGCTGGA TTTTGAGCGC GCGGTGGTTG TGCGCGACCA AATTACCGAT
TTGCGGCAAG TACAAGCGCA GCAGGTGATG GAGGCGGGCT ATAGCAACCA AGATGTTGTT
GCATGTGCTT CTGAATCTGG GGTGCATTGC ATTCATATAC TCTATGTGCG CCAGGGACGC
ATTGTGGGTA GCAAAAGCTA TTTGCCAAAA ACCAAGCTCG ATAGCACCGA GGAAGACGTG
CTAAGCGCAT TTCTCGCTCA CCACTACCTT GGTGGGGCCG CTATGGATGT ACCGCCACAC
ATTATTATTA GCCATAAGCT GGCCGACCAA TTAATTATTG GTGAGGCAGT AGAAAAGGCC
ACTGGCAAGC AGCTTAAGCT AACGCATAAC GTGCGTACCT ACCGCGCTAA GTGGCTAGCA
ATGGCCTTAG AAGCTGCGCG TCAAAACCTC AAGAACCATC TAAATAACAA GCAAACCTTG
GTGGCTAGGT TTGAATCCCT GCAAGACATA CTTGGTTTGG ATGAAACGCC TAATCGTATT
GAATGCTTCG ATATAAGCCA TAGCAGCGGC GAGTTAACTG TGGGTAGCTG TGTGGTGTTT
GACCAAAATG GCGCTAAAAA GTCAGATTAT CGCCGGTTTA ACATAGAAGG TATAAAAGCA
GGGGACGACT ATGCGGCGAT GGAGCAGGTA TTAACCCGCC GGTACACGCG CCTGCAGAAA
GAATCCAGCA GCATGCCTGA TTTGGTGTTA ATTGATGGCG GCAAAGGCCA GTTGTCTAAG
GCAAAAGCCG TTGTGGAGGA GCTGGGTATC CACGATATGA TGCTCATAGG TGTGGCCAAG
GGCACCACGC GTAAACCGGG TTTCGAAACC TTGGTGCTAA CCAGCGGGGC AGAGCGTGTA
CTAAAGGCCG ATAGCGCAGC CCTGCATCTT ATTCAGCAAA TACGCGATGA GGCCCACCGT
TTTGCAATTA CGGGTCACAA GCAGCGTCGA GACAAAAAGC GTCGTACTTC TGTGTTAGAA
GGAATACCGG GCGTGGGGCC GAAGCGCAGA AAAGAGTTGT TGGTGCATTT TGGCGGTTTA
CAAGAAGTAT TGCGTGCTAA TGTCGATGAT TTGGCCAAAG CGCCTTCAAT TAGCAAAAAA
ATGGCACAAG AGATTTACAA TGTACTGCAT AGTGAGTAA
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| Protein sequence | MSQHQPPPVF DSTSFLKNVT KLPGVYQMYD ADGAILYVGK AKNLKNRLSS YFRATGLTPK
THALVKRIQA IEVTVTPSEA EALVLEHNLI KSQKPPFNIL LRDDKSFPYI FISEGEPYPK
LAFHRGPKKK KGQYFGPFPN ASAVKETLNF LQRTFRVRQC EDSVFRSRTR PCLQYQIGRC
TGPCVEAISV EDYAVDLAHT AMFLDGKSEV LQQELQVEME QASQALDFER AVVVRDQITD
LRQVQAQQVM EAGYSNQDVV ACASESGVHC IHILYVRQGR IVGSKSYLPK TKLDSTEEDV
LSAFLAHHYL GGAAMDVPPH IIISHKLADQ LIIGEAVEKA TGKQLKLTHN VRTYRAKWLA
MALEAARQNL KNHLNNKQTL VARFESLQDI LGLDETPNRI ECFDISHSSG ELTVGSCVVF
DQNGAKKSDY RRFNIEGIKA GDDYAAMEQV LTRRYTRLQK ESSSMPDLVL IDGGKGQLSK
AKAVVEELGI HDMMLIGVAK GTTRKPGFET LVLTSGAERV LKADSAALHL IQQIRDEAHR
FAITGHKQRR DKKRRTSVLE GIPGVGPKRR KELLVHFGGL QEVLRANVDD LAKAPSISKK
MAQEIYNVLH SE
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