Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2031 |
Symbol | |
ID | 3967294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2559095 |
End bp | 2560714 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921119 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_527503 |
Protein GI | 90021676 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00115375 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACC TAATAGTTAA AAATTTAACC ACCCACTTTT ATACACGCGA AGGTTTAACC ACCGCTGTAG ATAACGTTAG CTTTACCCTA GAAGCGGGCC AAATACTTGG CATAGTTGGC GAATCCGGCT CGGGTAAATC TGTTGCTTGC TACAGTTTGC TAGGTTTAAT TCCTAGCCCA CCGGGCAAAG TGGTTAATGG CAGCGCTCTG TTTAACGGCG AAGACCTTCT TACTAAAACA GAAGCGGAAT TACGCAGTGT GCGCGGCAGA AAAATTAGCA TGATTTTTCA AGACCCTATG ACCTCCCTCA ACCCGCACAT GCGTATAGGT GATCAACTAA TAGAAGCCTA TCGCTTGCAC CACAAAAGCA CTAAAAAACA GGCAACCGAA AAGGCGATAC AGCTTCTACA AGAAGTGGGT ATTAAAGACG CCGACACACG CATACGTGCC TACCCTCATG AATTTTCTGG CGGTATGCGA CAGCGCGCCA TGATCGCCAT GGCTTTGATT ACCGAGCCAG AATTATTAAT AGCCGACGAA CCAACAACTG CACTGGACGT AACCGTACAA GCGCAAATTC TACAGTTGAT TAAATCGATC CAGCAGAAGC GACACCTAAG TGTCATTTTT ATTTCGCACG ACTTAGCTGT AGTTTCACAA ATTGCCGACC AGCTTATCGT TATGAAAGAA GGTAAGGTGG TAGAAAGCGG TGCAACTGCG AGCGTTTTTA GCGAGCAAAA GCACCCTTAT ACAAAAAAAT TAATTGCTGC TATTCCCAAT AAAGCCAAGC AGGTTAAATA TACCGCTACC GAAACCAACC CTTTGTTAAC GGTTAATAAT CTTTCCACCA GCTTCGCGCA AGAAACCACC AGTTGGTTTG GCAAAAAGGC CGCCCGTAAG GTAGTGGTAA AAGATATTAG CTTTTCAATT CAGCAAGGCG AAATACTCGG GTTAGTTGGT GAGTCTGGCT CGGGTAAATC TACCCTTGGT CGCAGTGTTA TTAAATTAAT TAACGCCGAT AACGGCGAAA TAAACATAGA CCAACATTGC ATTCACACCT TGCAAGGTGA CAAGCTAAAA CAAGCCCGCA AAGATTTTCA AATGATCTTT CAAGACCCGT ACGCGTCGCT TAACCCAAGG TTAACGGTAT TTGACGCGCT GGCAGAACCG CTGCTTTTGC ACGGCATTGC CAACAAAACC AATGTGGTGG AGAAAGTTAA CACCTTAATG GATGACGTAG GCCTTGCCCG TAAGTTTGTG CGCAAATACC CCCATGAGTT TTCTGGTGGC CAGCGCCAGC GTATAGCCAT AGCTCGCGCC TTAGCCCCAC AACCAAAGCT CATAATTGCC GATGAGCCCG TATCGGCGTT GGATGTAACC ATCCAAGCAC AAATATTAGA GCTACTGCTT AACCTTACTC AAAAGCACTG CCTCGCTATG TTATTTATTT CGCACGATTT AGCCGTTGTG CGCTACCTGT GCGACCGAGT AATGGTTATG CACAACGGCA ACCTTGTAGA GCAAGGGCCT ACCGAAGACA TTTATAACCA GCCCACTCAC CCTTATACCC AAACGTTAAT TAGCGCGATT CCAACTTTTA TGACACAAAA TATGCACTAA
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Protein sequence | MSHLIVKNLT THFYTREGLT TAVDNVSFTL EAGQILGIVG ESGSGKSVAC YSLLGLIPSP PGKVVNGSAL FNGEDLLTKT EAELRSVRGR KISMIFQDPM TSLNPHMRIG DQLIEAYRLH HKSTKKQATE KAIQLLQEVG IKDADTRIRA YPHEFSGGMR QRAMIAMALI TEPELLIADE PTTALDVTVQ AQILQLIKSI QQKRHLSVIF ISHDLAVVSQ IADQLIVMKE GKVVESGATA SVFSEQKHPY TKKLIAAIPN KAKQVKYTAT ETNPLLTVNN LSTSFAQETT SWFGKKAARK VVVKDISFSI QQGEILGLVG ESGSGKSTLG RSVIKLINAD NGEINIDQHC IHTLQGDKLK QARKDFQMIF QDPYASLNPR LTVFDALAEP LLLHGIANKT NVVEKVNTLM DDVGLARKFV RKYPHEFSGG QRQRIAIARA LAPQPKLIIA DEPVSALDVT IQAQILELLL NLTQKHCLAM LFISHDLAVV RYLCDRVMVM HNGNLVEQGP TEDIYNQPTH PYTQTLISAI PTFMTQNMH
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