| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1948 |
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| Symbol | |
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| ID | 3967054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2450044 |
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| End bp | 2450724 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637921036 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527420 |
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| Protein GI | 90021593 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.679676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGTTAC TAGTAGTCGA AGACGAAGTC AAAACCGGGG ATTATTTGCA GCAAGGCCTG
AGCGAAGCCG GCTTTATGGT GACGCTCGCT CGGAACGGTC TCGATGGCCA TCACCTGGCG
ATGACGGAGA CCTTTGATTT GTTGATTCTC GATGTGATGC TGCCCGATGT GGGCGGCTGG
CGCATTGTTC AGTCCATAAG AGAATCGGGA TGCCAGGCGC CCGTATTATT TCTCACCGCG
CGCGACAGTG TTGATGATCG TGTTAAAGGA TTAGAACTTG GCGCTGATGA CTACCTGGTT
AAGCCCTTCG CGTTTGCCGA ATTGCTGGCT CGGGTACGCA CCTTGTTGCG TAGAAGTACG
GCGCCGGTAC TCGCCGATCA GATCACAGTA GCGGATTTGA TCCTCGATCT GCCAAAGCAT
CGTGCCCTTC GTGGTGGGCG CAAAATCAAT CTCAGTCATA AGGAATTTTG TTTGCTGGAA
CTGCTTGCTC GGCGCCAGGG TGAAGTGCTG CCACGCTCGT TGATTGCTTC CCAGGTGTGG
GATATGAATT TTGACTCCGA TACCAATGTG ATTGATGTCG CCATCCGTCG TTTAAGAAGC
AAAATTGATG AAGGCTTTGA GCCCAAGCTG ATCCATACCG TTCGTGGCAT GGGCTACAAA
CTCGATGTTG AGGACGAATA G
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| Protein sequence | MRLLVVEDEV KTGDYLQQGL SEAGFMVTLA RNGLDGHHLA MTETFDLLIL DVMLPDVGGW
RIVQSIRESG CQAPVLFLTA RDSVDDRVKG LELGADDYLV KPFAFAELLA RVRTLLRRST
APVLADQITV ADLILDLPKH RALRGGRKIN LSHKEFCLLE LLARRQGEVL PRSLIASQVW
DMNFDSDTNV IDVAIRRLRS KIDEGFEPKL IHTVRGMGYK LDVEDE
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