Gene Sde_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1907 
SymboldjlA 
ID3966971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2409357 
End bp2410172 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content46% 
IMG OID637920992 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_527379 
Protein GI161486755 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTACA TGTATATAGG TACCGTAATC GGCGCGTTAA TTGGTTTTTT TACTCTGGGG 
CCTCCGGGAG CCCTATTTGG TGGGGTTGCT GGCCATTTCT TCGATAAAGG TAGGATGAAA
GTTGCTGCAA GCTTTACTCC CGAAGCACGT AAAGCGGTAG AGCAGGCATT CTTTAACACG
GTATTTCCTT TAATGGGGGT AATTGCCAAG GCCGATGGCC GAGTTTGCGA GGATGAGATT
GGCAATACTG AACAGCTAAT CGCCGCTATG CGCCTAGATA GCGACGCGCG TAGCCAAGCT
ATTAGACTGT TTCAGAGTGG AAGCAAAGGG GAGCAGTCGG TAGATGCTAT TTTAGATGCA
TTTTTAGTCG ATTGCGGCCA ATATCGCGAC CTAAAACAGC TATTGCTTGT GTATTTGATC
ACTCTTGCCT ATGCGGATGG CACTTTGGAC CAGGCAGAGG AAAATATACT CGCAAGTATT
GCCACACGCT TAGGGTATTC CAGCTTTGCT TTTAATCATT TACTTGGCAT GGTTAAAGCA
CAGTTTCACT TTGATAATCG TCAGCGTTCG GGCAGTGGTG GCCGTGCCTC TAGTCAATCG
GATTTATCGA CTGCTTATAC CGCTTTGGGG GTTGAGCCAT CGGTATCGGA TTCTGAGTTA
AAGCGGGCGT ACCGCAAGCT AATGAGTGAG TATCATCCAG ATAAGCTCGC TGGGCAGGGC
GTACCTGAGC ATGTAATTAA AGTGGCGACC GAAAAATCTC AAGAAATACA AAGTGCTTAT
GAGATGATAA AGAAACAAAG AAAATCGCAA AGTTAA
 
Protein sequence
MSYMYIGTVI GALIGFFTLG PPGALFGGVA GHFFDKGRMK VAASFTPEAR KAVEQAFFNT 
VFPLMGVIAK ADGRVCEDEI GNTEQLIAAM RLDSDARSQA IRLFQSGSKG EQSVDAILDA
FLVDCGQYRD LKQLLLVYLI TLAYADGTLD QAEENILASI ATRLGYSSFA FNHLLGMVKA
QFHFDNRQRS GSGGRASSQS DLSTAYTALG VEPSVSDSEL KRAYRKLMSE YHPDKLAGQG
VPEHVIKVAT EKSQEIQSAY EMIKKQRKSQ S