| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1900 |
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| Symbol | |
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| ID | 3966964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2401134 |
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| End bp | 2401859 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920985 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_527372 |
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| Protein GI | 90021545 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00121959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGCT ATTTCATTTC GGATTTACAC CTTCAGCCGA GTCGAATGGA CTTGGCTAAG
GGCTACTATG ATTTCTGCGA GCAACACCTT AGCCAAGGCG ATGAGCTATA CATTCTAGGG
GATTTTTTCG ACGCCTGGAT TGGTGACGAC GAAGACGGAG CCTTCTACAA AGACGTTATC
CAACAGCTTG CAGCCCTAAA AGGGCGTGGA GTTAGTACAT ATTTTATGCA CGGCAACCGC
GACTTTTTGG TGGGCGGTAA ATTCGCCGAA CTTACTGGCG CTACACTGCT TGAAGAAAAC
TGCACCATTA CCTTAACTGA CGGACGCACA GCGCTTTTGT TACACGGCGA TAGCCTGTGC
ACCGGCGATA TTGAGTATAT GGCGTTCCGC CAGCAGGTGC GCAACCCAGC GTGGCAAGCT
CAAATTTTAG CTCTTCCGCT CGAGCACCGA CGTGCTATGG CAGCAGATTT ACGCGCCAAA
AGTAAGAGCA TGAACAGCAA TAAAGCTGAA GATATCATGG ATGTTGCCGA AACTAGCGTA
AATGCAGCTT TCGAGCAGGC TAACACTTCA CTCATGATTC ACGGCCACAC TCATCGCCCC
AACCGCCACA AGCACACAAA CAGCTTAGGG GTGTGCGAAC GCATAGTGTT AGGCGACTGG
GAGCAAACCG GCTGGTACTT AAAAGACGAC AACAGCGCTG TAGAACTAGT CGAATTCCCA
CTTTAG
|
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| Protein sequence | MARYFISDLH LQPSRMDLAK GYYDFCEQHL SQGDELYILG DFFDAWIGDD EDGAFYKDVI
QQLAALKGRG VSTYFMHGNR DFLVGGKFAE LTGATLLEEN CTITLTDGRT ALLLHGDSLC
TGDIEYMAFR QQVRNPAWQA QILALPLEHR RAMAADLRAK SKSMNSNKAE DIMDVAETSV
NAAFEQANTS LMIHGHTHRP NRHKHTNSLG VCERIVLGDW EQTGWYLKDD NSAVELVEFP
L
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