| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1896 |
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| Symbol | |
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| ID | 3966960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2393351 |
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| End bp | 2395414 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920981 |
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| Product | Outer membrane receptor proteins mostly Fe transport-like |
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| Protein accession | YP_527368 |
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| Protein GI | 90021541 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0390326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTC CCCTCATAAA ACTTAATAGT GCCAAAACAT TGTTTTCAAC AAGCGCTTTT
CTGTTTCTGG CTGCGCAAGC CGCAACCAGT AAAAATATAG AAACCGTAGT GGTAGAAGGC
ACAAAAACAA ACGCAGCACT TAACGAAAAT ACAACGAGCG CAACAGAAGT TACTAAACAG
CAGCTGGAAT CTTCTTTGGC GGAGCATTTT CAGCAAGTTG CTGTTAATGC ACCCGGCACA
TGGGTTAGCC GCGGCAGTGG CGTTGAGCAC TTAACCGCAC TAAGATCCCC CGTACTGACT
GGCGCCGGCG CTTGCGGGGC ATATTTAGCC ACAGAAGATG GCATTCCCCT ATTCGCCAAA
AACCTGTGTA ACGTGAACCA ACTAATGGTT ACAGATTTCA AATCTGCAAA TAACGTTACT
GTATTGCGCG GGCCTCAATC GGGCTTATTC GGCGGCAACG CTCTGTTTGG TGTACTGGAT
ATAAACACCA ACGCGGCATC ACATACCGAA GCCAACAAAC AAAATTTCGC AATTGGCCAA
TCCACATTAG GTTACAGCTC AGCCGCTATC GACTTAACCA ATAACTCTAA TGGCAATACT
CAAGGCCTAA GCGGCAGATT GACTCATAAT AATAGCCCGC GCGAATCCGC GTACTACAAT
CAGCAGTTTT TACACGCATA CCAACAAGTT AAAAAAACTA ACTACCAGCG TACAGATTCG
CTTAGCCTAA TGAATTTAGA ACAAGAAACT GCAGGCTATA TTTACGGCGA TGAAGCATAT
AAAAACAGTG ACTTAGCGAA TGGCAACAGC AACCCAGAAG CCTACCGAGA TGCTCGTAAT
ATACGCGGTT ACTCAAAATT TGAGTGGCAA AATAGCGCAC ACTCAACGTC TGCCACGCCC
TACTTTAGGC ACAATGAAAT GCAACTACTT ATGCATTTCG TACCTTGGCA GCCGGTTGAA
AAAAATCAAC ATAGCTCCGC TGGATTACAA CTTCAACACA CACGGCATAT TGCCAACACC
GCCTTTACTG TAGGCCAAGA TATAGAATTC ACTAGCGCCG AGCTAACCGA GATTCAATAT
AAACCTGCAC CGTTTAACCA AGCAGCATTC CCAGAAGGCA CCCATTACAA TTACAACGTA
ACCGCCATTA ATGCTGGCTG GTATATACGC GCCGAGTGGC AAGCCAACGA AAAATTAACG
CTAACGCCCA CCTTAAGCGC AAATATAGAC ACGTTAAAAT ACCGCAACAA TGTGGAGGCC
GGCTACGCCT GCGAAAACCC AAACAATTGC CGGTTTTATC GCCCTGCGAG CAAAACGGAT
ACCTTTAAGG TTGTTAGCCC AACGCTTACC GCCAGCTACA AACTGAATAG CAACAACACC
CTCTATGCAC GCGCTGCACA AGGGTATCGT ACGCCGCAAG CCACCGAGCT ATACCGGTTG
CAATCTAGCA ATCAAACCCC GCTATCCCAT ATAACTGGTA CAAGCTACGA GCTTGGGCTT
AGCGGTGCCT TGCACAGCCT TAACTATGCG CTAAGCGCCT ACACCATGCT CGTGAATGAC
GATATTTTAC TCGACAGCGA AAGACGCTTT ATTAACAACA TAAACACCCA ACACAAAGGG
CTGGAATACA CTATTACTTG GCAGGCAAGC CAGTCGTTAA GCTTTAATAC CAGCGGCACC
CACGCATTAC ATACTTACGC GAAATCGCCA ACAACTAACA ATACAGATTC AAACTTAGAT
GGAGCCCTGC TAGATACCGC CCCTAAAAAC ATGCATCAAG CTAATGTGCG CTGGCAGGCT
TCTACCGCCA CTATGTGGCA GCTACGCTGG GAAAAAATGG GCAAATACTA CACAGATAGT
GCTGCCAGCC AAGAATATGA AGGTCATCAA TTATTCCACT TAAGCCATAG CTGGCAGCCG
AGTAACAGCT ATGTGCTGCG AACTAAAATT TCGAACTTGC TCAATACCCG CTATGCCGAG
CGAGCTGACT ATGCGTTTGG TGAAGCGAGA TACTTCCCCG GCTTAGATCG CAGATTGACG
CTGGAATTAA GTGTGTATTG GTAG
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| Protein sequence | MRFPLIKLNS AKTLFSTSAF LFLAAQAATS KNIETVVVEG TKTNAALNEN TTSATEVTKQ
QLESSLAEHF QQVAVNAPGT WVSRGSGVEH LTALRSPVLT GAGACGAYLA TEDGIPLFAK
NLCNVNQLMV TDFKSANNVT VLRGPQSGLF GGNALFGVLD INTNAASHTE ANKQNFAIGQ
STLGYSSAAI DLTNNSNGNT QGLSGRLTHN NSPRESAYYN QQFLHAYQQV KKTNYQRTDS
LSLMNLEQET AGYIYGDEAY KNSDLANGNS NPEAYRDARN IRGYSKFEWQ NSAHSTSATP
YFRHNEMQLL MHFVPWQPVE KNQHSSAGLQ LQHTRHIANT AFTVGQDIEF TSAELTEIQY
KPAPFNQAAF PEGTHYNYNV TAINAGWYIR AEWQANEKLT LTPTLSANID TLKYRNNVEA
GYACENPNNC RFYRPASKTD TFKVVSPTLT ASYKLNSNNT LYARAAQGYR TPQATELYRL
QSSNQTPLSH ITGTSYELGL SGALHSLNYA LSAYTMLVND DILLDSERRF INNINTQHKG
LEYTITWQAS QSLSFNTSGT HALHTYAKSP TTNNTDSNLD GALLDTAPKN MHQANVRWQA
STATMWQLRW EKMGKYYTDS AASQEYEGHQ LFHLSHSWQP SNSYVLRTKI SNLLNTRYAE
RADYAFGEAR YFPGLDRRLT LELSVYW
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