Gene Sde_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1829 
Symbol 
ID3966813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2323220 
End bp2324140 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content41% 
IMG OID637920912 
Productmethionine sulfoxide reductase A 
Protein accessionYP_527301 
Protein GI90021474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.349811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCCA CGAAATATGG AAAAACAATT AAATTATTTC TGATGGATGC TGATCCTGAT 
GGAAGAATGG TTTGCGAACT ATCAAACTGG AATGGCAAGG CATATCGAAT TCCGCGAGGA
AAGGTTAAGG ATTGTTCGGA TAGACACGAT TTAAAAGGAA CATCTGTATA CCTGTTATTT
GGCCGAGCAG AATCTTCAAC CTCAAAGCCC AAAGCATATA TAGGTGAAGC TGAAAACGCT
TACTCTCGTC TTGTCCAGCA TGTGTCTGAA AAGGAATTTT GGAATGAGTC TGTAGTATTT
ATAAGCAAAG ATGAAAACCT TAATAAAGCC CACATTAAAT ATCTTGAGTC CAGGTTATAT
GAAATCGCCT CAACAGCAGG GCGATACGAT ATTCAAAATG GGAATACTCC AACAAGAAGT
TCCATTTCTG AATCAGATCA AGCAGAAATG GAAGAGTTTA TTGAATATAT AAAAATACTA
ATCAACACAA TGGGCTTCAA AGTTTTTGAG CCTCTTATTA AAGTCGAGTC CAGCTCACAA
GAGCCCGATG AGTGCTTTTA TGTTAAAGGT GCTCGGGGCG CCGATGGGCG AGGAAAAAGA
ACATCGGATG GTTTCGTTGT GTTTGCGGGC TCTCAGGTGG CTGCGGATAC AGTTCCATCA
TTCCCGAAAG GGTTCAATGC ACTTAGAGAC GAACTGATTG ATAATGAGAT TATTATCAAA
AAAAACGAGA CTTTGGTTCT CGCATCTGAC TATCTATTTA GTAGTCCATC TGCGGCAGCT
GCCGTAATTA TGGGACGAAG CGCGAACGGT CTAATTGAAT GGAAAAATAT ACAAGGCAAG
GAATTGAAAT CCGTCGAAGA ATCAGAAATA TCAAAAGCTA ACAAGTCAAT GCAGCCGACC
GCTAACGCGT CGGCTGATTG A
 
Protein sequence
MYSTKYGKTI KLFLMDADPD GRMVCELSNW NGKAYRIPRG KVKDCSDRHD LKGTSVYLLF 
GRAESSTSKP KAYIGEAENA YSRLVQHVSE KEFWNESVVF ISKDENLNKA HIKYLESRLY
EIASTAGRYD IQNGNTPTRS SISESDQAEM EEFIEYIKIL INTMGFKVFE PLIKVESSSQ
EPDECFYVKG ARGADGRGKR TSDGFVVFAG SQVAADTVPS FPKGFNALRD ELIDNEIIIK
KNETLVLASD YLFSSPSAAA AVIMGRSANG LIEWKNIQGK ELKSVEESEI SKANKSMQPT
ANASAD