| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1809 |
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| Symbol | |
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| ID | 3966754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2301364 |
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| End bp | 2302608 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920892 |
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| Product | lipoprotein releasing system transmembrane protein LolE |
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| Protein accession | YP_527281 |
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| Protein GI | 90021454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA CTCTTCCTTT TCATATTGGT CTTCGCTACG TTCGTGCTAA ACGCCGTAAC
GGGTTTATCG CATTTGTAAG CTGGTTTGCC CTTTTGGGGA TGGCGCTTGG TGTATTCGCC
ATTATTGTCG TGCTTTCGGT AATGAATGGT TTCGATCGCG AGCTTAAAGA GCGTATTTTG
CGCGTGGTGC CCCACGGTTT TTTAACAACC GAAAAACCCC TCACGCAGTG GCGGGCACTT
TCTGAACAAA TTCAACATCA ACCCCATCTA TTAGCCTCAG CCCCCTATAT AGATGGCACT
GGCTTAGTTA GCTATGGCGG CGGTGTGCGG CCGGTAGAAA TACAAGGTAT AGACCCAGAT
TACGAGCGCA ACATCTCACT TGTGGATGAT TTTATGCTTG TGGGCGCGCT GTCAGATCTA
CAGGCTGGCG AGTATCAAAT CGTACTGGGT AACTTAATTG CCCGAAACCT GGGCTTAGCC
ATTGGCGATA CAGTCGCGGT TACCTTGCCG CAGGTAAGTA TAACCCCCGC AGGTGTGTTT
CCACGCAGTA AGCGCTTTAC GCTTATTGGG GTATTTGAAG TAGGTGCGCA GGTTGACCAA
AGCCTAGCGC TTATTCATAT AGACGATGCC AAAAAGCTTT TTCGCATGGG TGATAGCGTT
GCTGGCTTAC ATTTGAAATA CGACGATATC TATAGTGCTC CTGCAGAAAT CTCTAAATTA
AAAGCCTCTT TAGGCGAAGG TTACACCACC AAGGATTGGA GCCAAACGCA GGGCAGCCTT
TTTCAAGCAG TAAAAATGGA AAAGACCGTA GTCGCAATTA TGTTAAGCAT AATTATCGCA
GTAGCTGCTT TTAATATTGT GACCAGTCTA ATAATGATGG TGGTAGAAAA ACGCAGTGAC
ATTGCAGTGC TACGCACCCT TGGTTTAACC CGTTTTGGCA TTATTCAAAT TTTTATGGTG
CAAGGTATAA CCATGGGCGT AGTGGGAATT GCCTTTGGTG CATTATTTGG TATGGGTGTG
GCAATTTATT TACCGCAAAT GATAGCCGGG TTAGAAGGCG CCACCGGTTG GCAATTGTTT
GACCCTGCTG TTTATTTCGT GAGTTTTTTA CCTTCGCAAT GGCGTGCGGA AGACACCATA
TTTGTTTGCT CTATGGCGAT ATTGATGTCG ATTGTGGCAA CCATATACCC CGCGTGGCGT
GCATCTAAAA TAGAGCCTGC AGAGGCCCTT CGTTATGATG TGTAG
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| Protein sequence | MSKTLPFHIG LRYVRAKRRN GFIAFVSWFA LLGMALGVFA IIVVLSVMNG FDRELKERIL
RVVPHGFLTT EKPLTQWRAL SEQIQHQPHL LASAPYIDGT GLVSYGGGVR PVEIQGIDPD
YERNISLVDD FMLVGALSDL QAGEYQIVLG NLIARNLGLA IGDTVAVTLP QVSITPAGVF
PRSKRFTLIG VFEVGAQVDQ SLALIHIDDA KKLFRMGDSV AGLHLKYDDI YSAPAEISKL
KASLGEGYTT KDWSQTQGSL FQAVKMEKTV VAIMLSIIIA VAAFNIVTSL IMMVVEKRSD
IAVLRTLGLT RFGIIQIFMV QGITMGVVGI AFGALFGMGV AIYLPQMIAG LEGATGWQLF
DPAVYFVSFL PSQWRAEDTI FVCSMAILMS IVATIYPAWR ASKIEPAEAL RYDV
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