Gene Sde_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1760 
Symbol 
ID3966666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2247962 
End bp2248696 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID637920843 
Producthypothetical protein 
Protein accessionYP_527232 
Protein GI90021405 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTG TTTTAGGCAT AGACAACCTT ATATTTATCT CCATATTAAC CAACAAACTG 
CCTGAAGCAA TAAGGCCCAA AGCTAGGCAA ATAGGCATTG GCGCTGCTTT AGTTCTGCGC
CTGCTTTTAC TGGGGTCCGT TGCCTTTATA GTCAAACTGG TTGAGCCTGT TATCACTGTA
TTCAGCCACT CATTCTCTTG GCGCGATCTA ATATTAATAG CTGGCGGGCT ATTTTTAGTA
TGGAAAGCCA CCAAAGAAAT CCACCACTAT GTCGACCCAG ACCCTGGGCC AGATAAACTC
AACCCTTCGG TTATAGCCAC GAGCTTTTCG GGCATAATTG TGCAAATTTT AATTTTAGAT
GCAGTATTCT CTATAGATAG TATTATTACT GCAGTGGGCA TGACCAATCA CATCCCTATT
ATGTTTGTCG CTGTAATTTT TGCTGTGGTT ACAATGATGC TTGCCGCAAC GCCGCTCGCA
AACTTTATAA ATGCCAACCC AACTATCGTT ATGCTTGCCC TTGGCTTTTT GATGTTGATA
GGCACCACAC TCATTGCGGA TGGCTTCGGG TTCCATGTAC CTAAAGGATA TATTTATGCA
GCAACGAGTT TTTCTGCACT AGTAGAAATG CTAAATATTC TATCGAGAAG AGCTCGTCAG
AAAGCGAACA AGCAAGAAAA TAGCAAGGCG ATAGAGTGTC AAAAGAAAAG CATTGGTGGG
AAGGTTAGCC AATAG
 
Protein sequence
MEVVLGIDNL IFISILTNKL PEAIRPKARQ IGIGAALVLR LLLLGSVAFI VKLVEPVITV 
FSHSFSWRDL ILIAGGLFLV WKATKEIHHY VDPDPGPDKL NPSVIATSFS GIIVQILILD
AVFSIDSIIT AVGMTNHIPI MFVAVIFAVV TMMLAATPLA NFINANPTIV MLALGFLMLI
GTTLIADGFG FHVPKGYIYA ATSFSALVEM LNILSRRARQ KANKQENSKA IECQKKSIGG
KVSQ