| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1755 |
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| Symbol | |
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| ID | 3966661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2240475 |
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| End bp | 2243402 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920838 |
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| Product | hypothetical protein |
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| Protein accession | YP_527227 |
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| Protein GI | 90021400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000113788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGAG TTCACGTGTT CATTAAAACC ACCTATCTTT TAAAGCGGTT TGCTATGTGC
TGGCTAATCG CGCTTAGTTT GCTAACCAGT AATGCTGTAT TAGCGCTAGG GGATGCAGGT
TATATAAGTT TTAAAGCGAA TGGCGGTGTG CGGTTAGCAG ACGAGGAGCA CCTGGCAAGC
TTACTTGTAG ATACCAACGA TTATAAGGGG CTACAAAGGG CAGCGGCAGA CTTGCAAACA
GATATGCAGC GCGTAACCGG TAAGCTACCT ACGTTGCACT CGCAGCTTAA AGATGCCGGT
AGGCACGCTG TGATCATTGG GTCTGTAGGG CGCAGTGGGT TAATACAATT GCTTGTAGAG
CAGAATAAAT TGAATGTGGC AGACATAGAA GGGCAGTGGG AAGCCTACAA ACTAGTGGTG
GTGGATAAAC CCTTCCCCAA TATAGAAAAA GCGTTAGTTA TTGCAGGCAG TGACATGCGA
GGTGCCATTT TTGGGGTATA CGATTTATCG CAGCAAATTG GCGTTTCGCC TTGGTATTGG
TGGGCAGATG TGCCCGTTCA ACCGCAAAGC AAGCTATACG TGCGTGGTGA TACCCACATA
GTTGAGCAGC CCAAGGTGCA GTACCGCGGT ATATTTTTAA ACGACGAAGC ACCCGCACTT
ACCAATTGGG TGCACGCCAA CTACGGCAAC TATAACAGCC AATTTTACAC GCAGGTTTTT
GAGCTACTGT TACGGCTAAA GGCGAATTTT TTATGGCCTG CAATGTGGAA CAACAGCTTT
AGTGTGGATG ACCCTTTAAA CCCGGTACTT GCCAATGAAT ATGGCATAGT GATGAGTACT
TCGCACCACG AGCCCATGAT GCGCGCCCAT AAAGAGTGGC ACGGAATGGG CCGCTGGGAT
TTCACCACCA ATGCAGATGC GCTAAAACAG TTTTGGCGCG AAGGTGTAGA GCGCAACAGC
CCCTACGAAA ACATTATAAC CATGGCCATG CGCGGTGATG GCGACGAAGC CATGTCTGAA
GATGCCAATG TGGAATTGCT AGAGCAAATA GTCGAAGCAC AGCGCAATAT TATTGCAGAG
GTATTTGAAC CCAAGGGTAA ACAAGTTACC GAAGTACCAC AGGTGTGGTG CCTATACAAA
GAAGTGCAAG ATTACTATGA AAAAGGCATG CGAGTGCCCG ACGATATAAC GCTTTTATGG
GCAGATGATA ATTGGGGCAA CATTCGCCGC CTGCCCACCG CCGAAGAGCG TAAGCGCAGT
GGTGGAGCGG GTGTGTATTA TCATTTCGAT TACGTAGGCG GGCCGCGCTC GTACCGTTGG
ATTAACACCA CGCCACTTGC AAAAATTTGG GAGCAAATGC ACCTAGCGTA CAAATACGAA
GCAAATAAAA TATGGATAGT TAACGTGGGT GATTTAAAAC CCATGGAAGC GCCCATAGAA
TACTTTTTAG AAATGGCGTG GAACCCCGAG CAATGGCCAA AAGAGCGTAT TACCCAATTT
GCTGAGCTTT GGGCAGAGCG TGAATTTGGG CCAACCTACG CTAAAGAAAT AGCCCAACTG
GTACAGGATT ACACCCAGCA CAATGGCCGC CGTAAACCTG AATTACAAGA GGCCAAGACA
TATAGCCTAT TGAATTACGA TGAAGCTGCG CGCATAGAGC AACAGCTTAC CGATATGGAA
AGCCGCGCAG AAACTCTCTT TAACAAAATA CCTGCTAACC AGCGCGATGC CTATTACCAA
TTGGTAATGC ACCCAGTGTT AGCAAGCGCT ACAGTCACCA AAATGTATAT TGCTCAGGCA
CGCAACCGGC TTTACGCAAA GCAGGGTAGG CCTATTGCTA ATAGTTACGG CCAGCAAGTA
AAGGAACTAT TTGAAAAAGA TGCTGCGTTA ACAAAACGGT ACCACTCTAT AAATAATGGC
AAGTGGAATC ACTTTATGTC GCAGCCACAT ATTGGCTACA CCCACTGGAA CAATCCAGAA
GACAATATAA TGCCGGTTGT GTCTGTGGTG TCCAAAGGTA ATAACGCAGA TATGGGCGTT
GCCGTAGAAG GCATGGAACC GGCTTGGCCC ACGCAAGATG TAGCTTTTGC ATTGCCAACG
TTCACCCCTT ACGGTAAACA AACAAAAATA CTCACGGTAT TTAATAAGGG CGTGAAGCCG
CTAAAGTTTT CCGTTAGCTC TGGTGCTGCG TGGTTAAAGG TATCGGCAAG TTCGGGTGAA
ATTACTCACC AAGAAATGCA AATACAGGTG AGCATCGATT GGGCGAAGTT ACCTTTGGGG
ATTCATGAGT CGAATGTAAC AATTAAAGGC CCAAGTTGGG TGGCGGCAAA CATTAAAGTA
ACAGCTAATA AGCCCGCTAA GGTTATACCG CTTAAAAAAT TAACGGGTTT TGTAGAAGCA
GACGGCTACA TTAGCTTCGA CGCCGCGGCG ACAACACATT CAAAAGCGGT AGACGGCTTT
GAGTGGCAAG AAATACCAGC CCACGGGCGC ACCCATTCTT CTATGTCTGT TTACCCCATT
CGCGATGCAT CGTTTGCCGC CCCTGCAAAC GCCAGCGCTA ATACCGCGCC ACAAATGCAC
TACTCCATTA CACTGCTAAC TGCAGGCGAG GTAACCGTAG AAGGGCTATT TGCCCCAACG
TGGCCAATCC ATCCAGAGCG AGGCTTGCGC TATGCCATTG CCTTCGACGA TCAGCCCCCT
CAAATTGTAG ATGTGTTAGC CGGTAATTCG CATAAGGTTT GGCAAGAATC TGTACGCACC
GGCGTTCGCC GCGCGAGTTC GAAGCACACC CTTACAGCCG GTACCCACAC GATGAAGGTG
TGGGCGATTG ACCCAGCTGT TACAGTACAA AAATGGATTA TTGATACCGG CGAGCTAAAA
CCAAGCTACC TAGGCCCAAC CCCCAGCCCT AGAGGCGGTA AGCACTAG
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| Protein sequence | MLRVHVFIKT TYLLKRFAMC WLIALSLLTS NAVLALGDAG YISFKANGGV RLADEEHLAS
LLVDTNDYKG LQRAAADLQT DMQRVTGKLP TLHSQLKDAG RHAVIIGSVG RSGLIQLLVE
QNKLNVADIE GQWEAYKLVV VDKPFPNIEK ALVIAGSDMR GAIFGVYDLS QQIGVSPWYW
WADVPVQPQS KLYVRGDTHI VEQPKVQYRG IFLNDEAPAL TNWVHANYGN YNSQFYTQVF
ELLLRLKANF LWPAMWNNSF SVDDPLNPVL ANEYGIVMST SHHEPMMRAH KEWHGMGRWD
FTTNADALKQ FWREGVERNS PYENIITMAM RGDGDEAMSE DANVELLEQI VEAQRNIIAE
VFEPKGKQVT EVPQVWCLYK EVQDYYEKGM RVPDDITLLW ADDNWGNIRR LPTAEERKRS
GGAGVYYHFD YVGGPRSYRW INTTPLAKIW EQMHLAYKYE ANKIWIVNVG DLKPMEAPIE
YFLEMAWNPE QWPKERITQF AELWAEREFG PTYAKEIAQL VQDYTQHNGR RKPELQEAKT
YSLLNYDEAA RIEQQLTDME SRAETLFNKI PANQRDAYYQ LVMHPVLASA TVTKMYIAQA
RNRLYAKQGR PIANSYGQQV KELFEKDAAL TKRYHSINNG KWNHFMSQPH IGYTHWNNPE
DNIMPVVSVV SKGNNADMGV AVEGMEPAWP TQDVAFALPT FTPYGKQTKI LTVFNKGVKP
LKFSVSSGAA WLKVSASSGE ITHQEMQIQV SIDWAKLPLG IHESNVTIKG PSWVAANIKV
TANKPAKVIP LKKLTGFVEA DGYISFDAAA TTHSKAVDGF EWQEIPAHGR THSSMSVYPI
RDASFAAPAN ASANTAPQMH YSITLLTAGE VTVEGLFAPT WPIHPERGLR YAIAFDDQPP
QIVDVLAGNS HKVWQESVRT GVRRASSKHT LTAGTHTMKV WAIDPAVTVQ KWIIDTGELK
PSYLGPTPSP RGGKH
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