Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1755 |
Symbol | |
ID | 3966661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2240475 |
End bp | 2243402 |
Gene Length | 2928 bp |
Protein Length | 975 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920838 |
Product | hypothetical protein |
Protein accession | YP_527227 |
Protein GI | 90021400 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000113788 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAG TTCACGTGTT CATTAAAACC ACCTATCTTT TAAAGCGGTT TGCTATGTGC TGGCTAATCG CGCTTAGTTT GCTAACCAGT AATGCTGTAT TAGCGCTAGG GGATGCAGGT TATATAAGTT TTAAAGCGAA TGGCGGTGTG CGGTTAGCAG ACGAGGAGCA CCTGGCAAGC TTACTTGTAG ATACCAACGA TTATAAGGGG CTACAAAGGG CAGCGGCAGA CTTGCAAACA GATATGCAGC GCGTAACCGG TAAGCTACCT ACGTTGCACT CGCAGCTTAA AGATGCCGGT AGGCACGCTG TGATCATTGG GTCTGTAGGG CGCAGTGGGT TAATACAATT GCTTGTAGAG CAGAATAAAT TGAATGTGGC AGACATAGAA GGGCAGTGGG AAGCCTACAA ACTAGTGGTG GTGGATAAAC CCTTCCCCAA TATAGAAAAA GCGTTAGTTA TTGCAGGCAG TGACATGCGA GGTGCCATTT TTGGGGTATA CGATTTATCG CAGCAAATTG GCGTTTCGCC TTGGTATTGG TGGGCAGATG TGCCCGTTCA ACCGCAAAGC AAGCTATACG TGCGTGGTGA TACCCACATA GTTGAGCAGC CCAAGGTGCA GTACCGCGGT ATATTTTTAA ACGACGAAGC ACCCGCACTT ACCAATTGGG TGCACGCCAA CTACGGCAAC TATAACAGCC AATTTTACAC GCAGGTTTTT GAGCTACTGT TACGGCTAAA GGCGAATTTT TTATGGCCTG CAATGTGGAA CAACAGCTTT AGTGTGGATG ACCCTTTAAA CCCGGTACTT GCCAATGAAT ATGGCATAGT GATGAGTACT TCGCACCACG AGCCCATGAT GCGCGCCCAT AAAGAGTGGC ACGGAATGGG CCGCTGGGAT TTCACCACCA ATGCAGATGC GCTAAAACAG TTTTGGCGCG AAGGTGTAGA GCGCAACAGC CCCTACGAAA ACATTATAAC CATGGCCATG CGCGGTGATG GCGACGAAGC CATGTCTGAA GATGCCAATG TGGAATTGCT AGAGCAAATA GTCGAAGCAC AGCGCAATAT TATTGCAGAG GTATTTGAAC CCAAGGGTAA ACAAGTTACC GAAGTACCAC AGGTGTGGTG CCTATACAAA GAAGTGCAAG ATTACTATGA AAAAGGCATG CGAGTGCCCG ACGATATAAC GCTTTTATGG GCAGATGATA ATTGGGGCAA CATTCGCCGC CTGCCCACCG CCGAAGAGCG TAAGCGCAGT GGTGGAGCGG GTGTGTATTA TCATTTCGAT TACGTAGGCG GGCCGCGCTC GTACCGTTGG ATTAACACCA CGCCACTTGC AAAAATTTGG GAGCAAATGC ACCTAGCGTA CAAATACGAA GCAAATAAAA TATGGATAGT TAACGTGGGT GATTTAAAAC CCATGGAAGC GCCCATAGAA TACTTTTTAG AAATGGCGTG GAACCCCGAG CAATGGCCAA AAGAGCGTAT TACCCAATTT GCTGAGCTTT GGGCAGAGCG TGAATTTGGG CCAACCTACG CTAAAGAAAT AGCCCAACTG GTACAGGATT ACACCCAGCA CAATGGCCGC CGTAAACCTG AATTACAAGA GGCCAAGACA TATAGCCTAT TGAATTACGA TGAAGCTGCG CGCATAGAGC AACAGCTTAC CGATATGGAA AGCCGCGCAG AAACTCTCTT TAACAAAATA CCTGCTAACC AGCGCGATGC CTATTACCAA TTGGTAATGC ACCCAGTGTT AGCAAGCGCT ACAGTCACCA AAATGTATAT TGCTCAGGCA CGCAACCGGC TTTACGCAAA GCAGGGTAGG CCTATTGCTA ATAGTTACGG CCAGCAAGTA AAGGAACTAT TTGAAAAAGA TGCTGCGTTA ACAAAACGGT ACCACTCTAT AAATAATGGC AAGTGGAATC ACTTTATGTC GCAGCCACAT ATTGGCTACA CCCACTGGAA CAATCCAGAA GACAATATAA TGCCGGTTGT GTCTGTGGTG TCCAAAGGTA ATAACGCAGA TATGGGCGTT GCCGTAGAAG GCATGGAACC GGCTTGGCCC ACGCAAGATG TAGCTTTTGC ATTGCCAACG TTCACCCCTT ACGGTAAACA AACAAAAATA CTCACGGTAT TTAATAAGGG CGTGAAGCCG CTAAAGTTTT CCGTTAGCTC TGGTGCTGCG TGGTTAAAGG TATCGGCAAG TTCGGGTGAA ATTACTCACC AAGAAATGCA AATACAGGTG AGCATCGATT GGGCGAAGTT ACCTTTGGGG ATTCATGAGT CGAATGTAAC AATTAAAGGC CCAAGTTGGG TGGCGGCAAA CATTAAAGTA ACAGCTAATA AGCCCGCTAA GGTTATACCG CTTAAAAAAT TAACGGGTTT TGTAGAAGCA GACGGCTACA TTAGCTTCGA CGCCGCGGCG ACAACACATT CAAAAGCGGT AGACGGCTTT GAGTGGCAAG AAATACCAGC CCACGGGCGC ACCCATTCTT CTATGTCTGT TTACCCCATT CGCGATGCAT CGTTTGCCGC CCCTGCAAAC GCCAGCGCTA ATACCGCGCC ACAAATGCAC TACTCCATTA CACTGCTAAC TGCAGGCGAG GTAACCGTAG AAGGGCTATT TGCCCCAACG TGGCCAATCC ATCCAGAGCG AGGCTTGCGC TATGCCATTG CCTTCGACGA TCAGCCCCCT CAAATTGTAG ATGTGTTAGC CGGTAATTCG CATAAGGTTT GGCAAGAATC TGTACGCACC GGCGTTCGCC GCGCGAGTTC GAAGCACACC CTTACAGCCG GTACCCACAC GATGAAGGTG TGGGCGATTG ACCCAGCTGT TACAGTACAA AAATGGATTA TTGATACCGG CGAGCTAAAA CCAAGCTACC TAGGCCCAAC CCCCAGCCCT AGAGGCGGTA AGCACTAG
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Protein sequence | MLRVHVFIKT TYLLKRFAMC WLIALSLLTS NAVLALGDAG YISFKANGGV RLADEEHLAS LLVDTNDYKG LQRAAADLQT DMQRVTGKLP TLHSQLKDAG RHAVIIGSVG RSGLIQLLVE QNKLNVADIE GQWEAYKLVV VDKPFPNIEK ALVIAGSDMR GAIFGVYDLS QQIGVSPWYW WADVPVQPQS KLYVRGDTHI VEQPKVQYRG IFLNDEAPAL TNWVHANYGN YNSQFYTQVF ELLLRLKANF LWPAMWNNSF SVDDPLNPVL ANEYGIVMST SHHEPMMRAH KEWHGMGRWD FTTNADALKQ FWREGVERNS PYENIITMAM RGDGDEAMSE DANVELLEQI VEAQRNIIAE VFEPKGKQVT EVPQVWCLYK EVQDYYEKGM RVPDDITLLW ADDNWGNIRR LPTAEERKRS GGAGVYYHFD YVGGPRSYRW INTTPLAKIW EQMHLAYKYE ANKIWIVNVG DLKPMEAPIE YFLEMAWNPE QWPKERITQF AELWAEREFG PTYAKEIAQL VQDYTQHNGR RKPELQEAKT YSLLNYDEAA RIEQQLTDME SRAETLFNKI PANQRDAYYQ LVMHPVLASA TVTKMYIAQA RNRLYAKQGR PIANSYGQQV KELFEKDAAL TKRYHSINNG KWNHFMSQPH IGYTHWNNPE DNIMPVVSVV SKGNNADMGV AVEGMEPAWP TQDVAFALPT FTPYGKQTKI LTVFNKGVKP LKFSVSSGAA WLKVSASSGE ITHQEMQIQV SIDWAKLPLG IHESNVTIKG PSWVAANIKV TANKPAKVIP LKKLTGFVEA DGYISFDAAA TTHSKAVDGF EWQEIPAHGR THSSMSVYPI RDASFAAPAN ASANTAPQMH YSITLLTAGE VTVEGLFAPT WPIHPERGLR YAIAFDDQPP QIVDVLAGNS HKVWQESVRT GVRRASSKHT LTAGTHTMKV WAIDPAVTVQ KWIIDTGELK PSYLGPTPSP RGGKH
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