Gene Sde_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1738 
Symbol 
ID3966546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2214480 
End bp2215040 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID637920821 
Producthypothetical protein 
Protein accessionYP_527210 
Protein GI90021383 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0392514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAA AAAATAGTGC ATCGTCTTAC GGATACATTG CTGTTGGCCT ACATTGGTTG 
GTAGCTGCCG GTGTGTTGGG TTTATTTGGC TTGGGTATTT GGATGGTAGA CCTCACTTAT
TACGACAGCT GGTACAAAAC CGCACCAGAT CTACATCGCA GTATTGGGGT AATTGTTGTT
ACGTTAATGG TATTGCGCTT AGTGTGGCGA CTCGCTAACC CGCCTCCTAG ACCCTTGGCT
AGCCATAGCT TTTGGGAGCG CCGAATAGCA CACTTGGCCC ATGCACTTTT GTACGCACTT
GTTATATCTA TGTTTTTTAG TGGTTATTTT ATTACAACGG CAAAGGGGCA GGCGCTTTAT
GTTTTTGAGG TGTTTTCTTT GCCGGCAATA ATTACAGATG TAGAAGGCTT GGAAGATGTA
GCAGGCGTAA TACACGAATG GGTGGCTTAT ACCATTATTG CTATTGTGTG CTTACATGTG
GCGGGTGCGT TAAAACATCA TTTTGTTGAT CGCGATAGCA CGCTGCGACG AATGTTAGGC
ATGACCCCCA AAAAAGTTTG A
 
Protein sequence
MALKNSASSY GYIAVGLHWL VAAGVLGLFG LGIWMVDLTY YDSWYKTAPD LHRSIGVIVV 
TLMVLRLVWR LANPPPRPLA SHSFWERRIA HLAHALLYAL VISMFFSGYF ITTAKGQALY
VFEVFSLPAI ITDVEGLEDV AGVIHEWVAY TIIAIVCLHV AGALKHHFVD RDSTLRRMLG
MTPKKV