| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1735 |
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| Symbol | |
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| ID | 3966543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2210178 |
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| End bp | 2211200 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920818 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_527207 |
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| Protein GI | 90021380 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCG ACTGGTTTAA AATAGCCGAA TTCCCCAAGA GTAAAGATCT TTCCCACCTA
GAAGCGTATT TAGCGCACCA GCAGGTGGAG TACAAAATTG AATCGCTAGG CTCGCAAAAT
GTACTGTTGT ACAAAAAGGC GAGTGATATC AACAGCTTTA AGATGTTCTT GAACGCGGTT
AATCAAGGTG TTATCGATAT AAACGCGCCA GCTTCCGAGG TGAGCCGCGC GCTGGCGAGC
GCGGCCAAGC CCAGCGTAAA GGCAAGTGGT GGCGATGCTC GGCGTGAGAC GATATCAATC
GATATGGCAT TAGCTAAATC AAATGCAGAA AAGCAAGCAG GTCAAGTTGA AGAAACAGAG
TTCGCCCAGC TAGATACTCA TCAACGCGAC GCGGCGTTTT CTGCCGTAAA CATGCTATTA
ATTAAAGCGC CGGCTCGACT CTGGCTATCT ATTTTATTTA TTGCATTAGG TGTGGCTGGG
TTTTATGTGC AAGAGCTTTT TTTAAATACC TCGCTGTTTC ACAGCCTGAC TTTTCTGCCG
TTAGAAAAGG CCGTTGCGAG TGGCCAGCCT TGGCGCATAC TTACCCCAGC TTTTCTACAT
TTTGGTTTAT TACACATAGT TTTTAATGCG CTGTGGCTAT GGATTTTGGG CGGCCGATTA
GAACTTTTTT TAGGACGTGG GCTGTATTTA GGTTTATTTG TGTTCACGGC GTTAGTGTCG
AATTACACAC AGTTTTTTAT GGAGCCAAGA GGTATTTTTG GCGGTTTGTC GGGTGTTGTA
TACGGCTATT TAGGGGCGCT GCTTGTACTT AACCGCACCT ATAAAAGCCC GCTAATTTAC
ATAATGCCAA GCTTAGCGGG CATGATGCTG TTGTTTTTAG GCCTAGGAGT ACTCGGCATT
ATCGACAATT TTATGGAAGG CAAAGTGGCA AACGGCGCAC ACATTGGCGG GTTGGTTGCC
GGTGTGATAT TTGGGTTGGT GCTAACGCAA TTGCGCAAAA CAGGCGTGAA AAGTAGTAAT
TAA
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| Protein sequence | MASDWFKIAE FPKSKDLSHL EAYLAHQQVE YKIESLGSQN VLLYKKASDI NSFKMFLNAV
NQGVIDINAP ASEVSRALAS AAKPSVKASG GDARRETISI DMALAKSNAE KQAGQVEETE
FAQLDTHQRD AAFSAVNMLL IKAPARLWLS ILFIALGVAG FYVQELFLNT SLFHSLTFLP
LEKAVASGQP WRILTPAFLH FGLLHIVFNA LWLWILGGRL ELFLGRGLYL GLFVFTALVS
NYTQFFMEPR GIFGGLSGVV YGYLGALLVL NRTYKSPLIY IMPSLAGMML LFLGLGVLGI
IDNFMEGKVA NGAHIGGLVA GVIFGLVLTQ LRKTGVKSSN
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