| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1733 |
|---|
| Symbol | ppnK |
|---|
| ID | 3966541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 2208225 |
|---|
| End bp | 2209109 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637920816 |
|---|
| Product | inorganic polyphosphate/ATP-NAD kinase |
|---|
| Protein accession | YP_527205 |
|---|
| Protein GI | 90021378 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0061] Predicted sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT TTTCATGTGT GGGTTTGATC GGTCGTTTAG ATAGTGATAA CGCCGCTTAC
TCGTTGCGAC GCCTAATTAG TTTTTTGGCA AAGCAAAATA TTGAAGTCAT GCTCGATGAA
GAAACGGCTG AGTTTTACAC CGAAAATGAG CTTGAAATAG TATCGCGAGA AACACTAGCC
AAGCGCTGCG ACCTCATTAT TGTGGTGGGT GGTGACGGCA GTTTACTCTC TGCGGCACGT
GCGTTTGCGG GTAAGCCCGT TAAATTGTTG GGTATAAACC GCGGTCGTTT GGGGTTTCTC
ACCGATATTA GCCCCGATGA AATTGAGTAT AAAGTAGGCG AAGTGCTAGC CGGCAAGTAT
GTGTCTGAAA GCCGGTTCTT GCTGCATTCT CAGCTTTATC GCGGTGAGGA GTTGATATCT
GAGGCGGTGG CATTAAACGA TGTGGTAATG CACCCAGGGC AGTTTATTCG CATGATTGAG
TTTGAGTTGT ACATAAACGA TGAGTTCGTT TACAGGCAAC GCTCAGATGG CTTGATTATC
TCATCGCCAA CGGGTGCTAC CGCTTATGCG CTTAGTTGCG GCGGGCCAAT AATGCACCCC
AGCCTAGATG CTATTGTACT TGTGCCCATG AACCCGCACA CGCTTAGCAG TCGACCTATA
GTTGTACATG GGTCTAGCAG AATCCGTTTG CTCATTGCAA AAGATAATCA CCTAAGCCCA
CATATCACCA ACGATGGTCA AACGCATGTG GTGACAAAGC CGGGTGACGA AGTGGTAGTA
ACAAAATCGC CAGATTTACT TGAGTTAATT CATCCAACAG ACCATAACTT TTATGAAACT
TGCCGCTCTA AACTGGGTTG GGCAAGCCAT ACGGGTGGTT GTTAA
|
|---|
| Protein sequence | MSQFSCVGLI GRLDSDNAAY SLRRLISFLA KQNIEVMLDE ETAEFYTENE LEIVSRETLA
KRCDLIIVVG GDGSLLSAAR AFAGKPVKLL GINRGRLGFL TDISPDEIEY KVGEVLAGKY
VSESRFLLHS QLYRGEELIS EAVALNDVVM HPGQFIRMIE FELYINDEFV YRQRSDGLII
SSPTGATAYA LSCGGPIMHP SLDAIVLVPM NPHTLSSRPI VVHGSSRIRL LIAKDNHLSP
HITNDGQTHV VTKPGDEVVV TKSPDLLELI HPTDHNFYET CRSKLGWASH TGGC
|
|---|
| |