Gene Sde_1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1718 
Symbol 
ID3966505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2191441 
End bp2192277 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content50% 
IMG OID637920799 
Producthypothetical protein 
Protein accessionYP_527190 
Protein GI90021363 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTA TCTACGATTT GCACTGCCAC AGTTTTTACT CGGACGGTAT TTTAAGCCCT 
AATGATCTGG TGTCGAGAGC TAAAGCACAC AATGTATCTT ATCTGGCGTT AACGGACCAT
GATACCACCC AAGGCATCGC AGTGGCGCAA AAGGCCGCAA AAGATGAAGG TATAGACCTA
ATTCCCGGTA TAGAGTTCTC TACCCAATGG TATGGCCGCG GTATTCACAT TGTGGGGTTG
AACATCGATT TAGACGCCGA GTCTCTTATT AATGGCGTGG CCAAGCAAGA GAACTCTCGT
GAGCAACGCG CACGTGCTAT CGCCGAAAGG CTTGCCGCAA AAGGCTATGA TGGCGCTTAC
GAAGGCGCTC AAAAATACTC CGGTAGCGAA TTATTAGGCA GGCCCCACTT TGCCAAATAT
TTGGTAGAAA TAGGCGCTGT GAAGAGCGTT GCTCAAGCTT TTAAACGCTA CTTAGGTGCT
GGAAAGGTAG GCGACGTGAA GCAAATGTGG CCCGATTTCG ACGAAGTGAT TGGCTGGATA
AAAGGCGCAG GTGGCGTAGC GGTGCTTGCC CACCCAGATA AATACGATAT GACGCGCACC
AAATTACGGT TGCTTACCGC CGACTTTGCA GAAGCGGGTG GCGAGGCCAT TGAGGTTATT
AGCGGTAAAC AAAAAGCTGG GTTGGCGGCT GATATGCAGC GCATTGCCGA TATGTTTGGC
CTTCACTCCT CCTGTGGTAG CGATTTTCAC AGCCCCGGTC AACCGTGGCA GGAATTAGGC
GCATTCGAAG CAATGCCAAA AAACGCAAGA CCAGTGTGGG AATTTTGGAG CACTTAG
 
Protein sequence
MTPIYDLHCH SFYSDGILSP NDLVSRAKAH NVSYLALTDH DTTQGIAVAQ KAAKDEGIDL 
IPGIEFSTQW YGRGIHIVGL NIDLDAESLI NGVAKQENSR EQRARAIAER LAAKGYDGAY
EGAQKYSGSE LLGRPHFAKY LVEIGAVKSV AQAFKRYLGA GKVGDVKQMW PDFDEVIGWI
KGAGGVAVLA HPDKYDMTRT KLRLLTADFA EAGGEAIEVI SGKQKAGLAA DMQRIADMFG
LHSSCGSDFH SPGQPWQELG AFEAMPKNAR PVWEFWST