| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1684 |
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| Symbol | |
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| ID | 3966471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2151745 |
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| End bp | 2153973 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920765 |
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| Product | isocitrate dehydrogenase (NADP+) |
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| Protein accession | YP_527156 |
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| Protein GI | 90021329 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000025647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACG AAACCCCAAA AATTATCTAC ACCGAAACAG ATGAAGCGCC AGCATTGGCT
ACTTATTCGT TGTTTCCTAT CGTAAAAAAA TACGCTGCAG CAGCAGGTGT TGAGCTAGAA
ATGCGCGACA TCTCATTGGC TGGCCGTATT TTAGCTGTAT TCCCTGAATT CCTTGCTGAA
GATCAGCGTC AATCTGATGC GCTTGCAGAG TTGGGTGAGC TAGCTAAACA GCCAAGCGCG
AACATTATTA AGTTGCCGAA TATTAGCGCT TCTATTCCAC AGTTGGTAGC GGCTATTAAA
GAGCTTCAAG CTAAAGGCTA TGCCTTACCC GATTACCCCG AAGAGCCTAA AGATGAGAAA
GAAGCGAGCA TCAAAGCACG CTACGACAGC GTTAAAGGTA GTGCGGTAAA CCCAGTGTTG
CGTGAAGGTA ACTCCGATCG TCGTGCGCCT GCTTCTGTTA AAGCTTACGC TCAGAAAAAC
CCACACAGCA TGGGTGAGTG GAAGTCTGAT TCCAAATCTC ACGTAGCTTC TATGGAAAGC
GGCGACTTTT TCGGTTCTGA AAAATCAGTA ACTGTAGATG CCGCAACAGC CGTGCGCATT
GAGCTTGTTG GCGCGGATGG TTCTGTAAAA GTATTAAAGG CTTCTACGCC GCTTTTGGCT
GGTGAAGTAA TTGATGCGTC TGTTTTGAGT AAGGCGGCTT TGCGCAACTT TATTGCTAAA
GAAATCGCCG ATGCTAAAGC GCAGGACGTT TTGTTTTCTG TGCATTTAAA AGCCACCATG
ATGAAAGTAT CTGACCCAAT TATTTTTGGT CATGTGGTGT CTGTATTCTT CGAAAGCGTT
TACACCAAGT ACGCCAGCGT ATTCGCCGAT TTGGGTATTT CGCCAAACAA TGGTTTGGGT
GACCTGTTTG CCAAAATTAA AGCGTTACCT GAAGATCTGC AAGCTGAGAT CAAAGCTGCT
GTTCAAGCGT GTTACGACAA CGGCCCACGC TTAGCTATGG TGAACTCCGA TAAGGGTATT
ACCAACCTGC ACGTGCCTAG CGATGTAATT ATCGATGCTT CTATGCCAGC TGCAATTCGC
ACCTCAGGCA TGATGTGGGG GCCAGATGGT AAAGCGGCCG ATACTAAAGC GGTTATCCCA
GATCGCAGCT ACGCGGGTGT TTACCAAGAA ACTATCGACT TCTGTAAGGC AAATGGTGCT
TTCGACCCTC GCACCATGGG CAGCGTATCA AACGTTGGTT TGATGGCGCA AAAAGCAGAA
GAGTACGGTT CACACGATAA AACTTTTGAA ATTCCAGCTG CCGGTACCGT TAAGGTTATC
GATGAGGCGG GTAACGTGCT TATTGAGCAC GCTGTAGAGC AGGGTGACAT TTGGCGTATG
TGCCAAGTAA AAGATGCACC TATCCAAGAT TGGGTGAAGT TGGCTGTTAA CCGCGCTCGC
GCGACTGGCA ACCCCGCTAT ATTCTGGTTA GATGCAAACC GTGCTCACGA TGCTCAGTTG
ATTGCGAAGG TAAATGCTTA TTTGCCTCAG CACGATACTT CTGGTTTGGA TATTCAAATT
CTTGCCCCTA AAGAAGCAAC GCGCTTTTCT TTAGAGCGCA TGAAAGAGAG TAAAGACACC
ATCTCTGTTA CAGGTAACGT TTTGCGCGAT TACTTGACTG ACTTGTTCCC TATTTTAGAA
TTGGGTACCA GTGCTAAGAT GCTGTCTATT GTTCCATTAA TGAACGGTGG CGGTTTATTT
GAAACTGGCG CTGGTGGTTC TGCTCCTAAG CATGTTGAGC AGTTGGTTGA TGAAAACCAT
TTGCGTTGGG ATTCTTTAGG TGAATTCCTG GCTTTAGCTG CTTCTTTGGA GCACTTAAGT
GAAGTAGCAA ACTTGCCAAA GGCTAAAGTA CTTGCCGATA CCTTGGATGC GGCTACAGCT
AAGTTCTTGG ATACCAATAA GTCTCCTTCA CGTAAAGTGG GTGAGTTGGA TAACCGTGGC
AGCCATTTCT ATTTGGCTAT GTACTGGGCA GAGGCGCTTG CGGCGCAGTC TGACGACGCT
GAGCTTCAAG CGAAATTCGC TGGTTTAGCA TCTACCCTTA CTGGTAGTGA AGCGGCAATC
GTTGAAGAGT TGAACGCGGT GCAGGGTTCT GCTGTTGATG TAGGCGGTTA CTACAAGTTG
GATGCTGAAT TGGCATCTAA GGTTATGCGT CCAAGTGCTA CCTTTAATGC AGCAATCGAT
GCGCTGTAA
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| Protein sequence | MTNETPKIIY TETDEAPALA TYSLFPIVKK YAAAAGVELE MRDISLAGRI LAVFPEFLAE
DQRQSDALAE LGELAKQPSA NIIKLPNISA SIPQLVAAIK ELQAKGYALP DYPEEPKDEK
EASIKARYDS VKGSAVNPVL REGNSDRRAP ASVKAYAQKN PHSMGEWKSD SKSHVASMES
GDFFGSEKSV TVDAATAVRI ELVGADGSVK VLKASTPLLA GEVIDASVLS KAALRNFIAK
EIADAKAQDV LFSVHLKATM MKVSDPIIFG HVVSVFFESV YTKYASVFAD LGISPNNGLG
DLFAKIKALP EDLQAEIKAA VQACYDNGPR LAMVNSDKGI TNLHVPSDVI IDASMPAAIR
TSGMMWGPDG KAADTKAVIP DRSYAGVYQE TIDFCKANGA FDPRTMGSVS NVGLMAQKAE
EYGSHDKTFE IPAAGTVKVI DEAGNVLIEH AVEQGDIWRM CQVKDAPIQD WVKLAVNRAR
ATGNPAIFWL DANRAHDAQL IAKVNAYLPQ HDTSGLDIQI LAPKEATRFS LERMKESKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVEQLVDENH
LRWDSLGEFL ALAASLEHLS EVANLPKAKV LADTLDAATA KFLDTNKSPS RKVGELDNRG
SHFYLAMYWA EALAAQSDDA ELQAKFAGLA STLTGSEAAI VEELNAVQGS AVDVGGYYKL
DAELASKVMR PSATFNAAID AL
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