Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1677 |
Symbol | |
ID | 3965154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2145011 |
End bp | 2146153 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637920758 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_527149 |
Protein GI | 90021322 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCATAG AAATAGCCCC TTTTACGCCC AACGACCCGC GACCAGCCAA TGAGATTACC GTCATTGTTG GCATGTCTGG CGGCGTGGAC TCCTCCGTTT CGGCGCTTTT GCTTAAGCAG CAGGGCTACA AGGTGGAAGG TTTGTTTATG AAAAACTGGG ACGAGGACGA CGGCACAGAA TACTGCACCG CCATGACCGA CCTGATGGAT GCCGCAGCCG TATGCCAAAA ACTCGATATT CACCTGCATA CAGCCAATTT CGCCCGCCAG TACTGGGATA ACGTATTCGA ATACTTCCTA GAGGAGTACA AGGCCTGCCG CACGCCCAAC CCTGATATTC TATGTAATAG AGAAATTAAA TTTAAAGTAT TCCTAGAGTA CGCCAAGAAA TTGGGTGCAG ATTACATCGC CACGGGCCAC TACACCCGCA CCAGCCAACA CGAAGGCTGC ACTCAACTGC GCAAAGGTTT AGACCCCAAT AAAGACCAAA GCTACTTTCT ACACGCGGTA GGCGAACAGG AATTTGCACA AACCCTCTTC CCTATTGGTG ACATTGAAAA GCCACAAGTG CGCGCAATTG CAGAAGAGCG CGGGCTTGTC ACCCATAACA AAAAAGACAG CACCGGCATA TGCTTTATTG GCGAGCGTCG CTTTAAAGAC TTTCTAGAAA CCTACCTGCC CGCGCAGCCC GGCGTTATCG TCGATGAAAA CGGTGTTGAA ATTGGTAAAC ACCAAGGCTT GATGTATCAC ACCATTGGCC AGCGCCAAGG CTTGGGCATT GGCGGCGTAC CAGGTCGCCC GGAAGCGCCT TGGTATGTGG CAGAAAAGCG CTTGCAAACC AATCAGCTAG TAGTGGTTCA AGGTAGCAAC CATCCTTTGC TGTTCAGCAA CGAACTTACA ACAGGCGCTA TGCATTGGAT AAACCCACGC TTGGCACCAA CACTTAGCGA ACCATTTCGC TGCACTGCAA AAACACGCTA CCGACAACCG GAACAGTGGT GTACGCTAAC GGCTAACGGC GACGGTGTTA TCGCAGTATT CGATGAGCCT CAGCGCGCCG TAACCCCTGG GCAGTCCGCT GTATTTTACC AAGGCGACAT CTGCCTTGGT GGGGCCGTAA TAGAAACAAC GCGCAAACAT TAG
|
Protein sequence | MAIEIAPFTP NDPRPANEIT VIVGMSGGVD SSVSALLLKQ QGYKVEGLFM KNWDEDDGTE YCTAMTDLMD AAAVCQKLDI HLHTANFARQ YWDNVFEYFL EEYKACRTPN PDILCNREIK FKVFLEYAKK LGADYIATGH YTRTSQHEGC TQLRKGLDPN KDQSYFLHAV GEQEFAQTLF PIGDIEKPQV RAIAEERGLV THNKKDSTGI CFIGERRFKD FLETYLPAQP GVIVDENGVE IGKHQGLMYH TIGQRQGLGI GGVPGRPEAP WYVAEKRLQT NQLVVVQGSN HPLLFSNELT TGAMHWINPR LAPTLSEPFR CTAKTRYRQP EQWCTLTANG DGVIAVFDEP QRAVTPGQSA VFYQGDICLG GAVIETTRKH
|
| |