Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1667 |
Symbol | cysB |
ID | 3965144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2135028 |
End bp | 2136002 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920748 |
Product | transcriptional regulator CysB |
Protein accession | YP_527139 |
Protein GI | 90021312 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00185974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC AGCAGTTACG TTACATTTGG GAAGTCGCTC ATCACGAGCT AAACGTATCG GCTACGGCAC AGAGCTTGTA CACATCGCAA CCTGGAATTA GTAAGCAGAT CCGGTTGCTA GAAGATGAGC TAGGTGTAGA AATTTTTTCG CGCAGCGGCA AGCATTTAAC GCGCATTACT CCTGCCGGGG AGGCAATACT TCGTACTGCG GGCGAGATAC TGCGTAAAGT AGAGAGCATT AAGCAGGTTG CGCAGGAATT CAGCAACGAG CGTAAAGGCA GCCTATCTAT TGCTACTACG CATACCCAGG CGCGCTACGC TTTACCGCCT GTAATAGGTA AGTTTATTCA AAACTACCCT GATGTTTCGC TGCATATGAA TCAGGGTACG CCGATGCAAA TTTCTGAAAT GGCTGCAGAC GGCACCGTAG ATTTTGCTAT CGCCACTGAG GCAATGGAGC TATTTAGCGA TTTAATTATG TTGCCTTGCT ACAAGTGGAA CCGCTGTATT CTTGTTCCTA AGGGGCACCC ACTAACGCAG TTATCGATGC TTAGCTTGGA AGATGTAGCT AAACACCCGC TGGTAACCTA TGTATTTGGG TTCACCGGCC GCTCGCGCCT AGATGAAGCA TTTTTGGAGC ATGGTTTAGC GCCTAAGGTA GTCTTTACCG CGGCAGATGC CGATGTAATT AAAACCTATG TACGCTTGGG CTTGGGCATA GGTATTGTGG CTAAAATGGC CTACAACGAG CAGGAAGACA GTGATTTGGT GGCGCTGGAT GCTAGTCACT TGTTCCGTGC TAGCACTACC AAAATAGGTT TCCGCAGGGG CACATTCTTA CGCGGCTTTA TGTATGAGTT TATAGAGGCG TTTGCGCCGC ACCTTACTAA AGAGGTGGTA AACGAGGCAT TTAACCGTCA TTCCAAGCTT GAATTGGATG AGCTGTTCTC TAATATCGAA TTGCCTGAAT ATTAG
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Protein sequence | MKLQQLRYIW EVAHHELNVS ATAQSLYTSQ PGISKQIRLL EDELGVEIFS RSGKHLTRIT PAGEAILRTA GEILRKVESI KQVAQEFSNE RKGSLSIATT HTQARYALPP VIGKFIQNYP DVSLHMNQGT PMQISEMAAD GTVDFAIATE AMELFSDLIM LPCYKWNRCI LVPKGHPLTQ LSMLSLEDVA KHPLVTYVFG FTGRSRLDEA FLEHGLAPKV VFTAADADVI KTYVRLGLGI GIVAKMAYNE QEDSDLVALD ASHLFRASTT KIGFRRGTFL RGFMYEFIEA FAPHLTKEVV NEAFNRHSKL ELDELFSNIE LPEY
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