| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1654 |
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| Symbol | |
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| ID | 3965170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2121871 |
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| End bp | 2122647 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920735 |
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| Product | ATPase |
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| Protein accession | YP_527126 |
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| Protein GI | 90021299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.544583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGTTG ATTCCCATTG TCACCTCGAC CGATTAGACC TTAGTCGCTA CGAAGACGGT
TTAGATGGCG CAATTGCTGC CGCAAAAGAG CAGGGTGTAA AAACCATGTT ATGCGTGTGC
ATTAGCGAAG AGAATAAACA GCAAGTAGTA GATATAGCCA GTAAATACGA AGGCTTATTT
TGCTCTGTGG GCACGCATCC ATCCGATGTA ACCAGCGAAG TTGTGAGTGT AGAAACGTTA
GTGGAATGGG CCAAAGCGCC AAAAGTTGTT GCGCTAGGTG AGTCGGGCTT AGATTACTAC
TACAGTAAAG ACTACGCAGA CATTCAAAAG CAAAGTTTTG CTAACCACTT AATTGCAGGC
GCCCAATTAG ATTTGCCCGT TATTGTGCAT ACGCGCGATG CAAGGCAAGA CACTTTAGAT
TTAATAAAAG AATACGGCAG CACTGAGTCT GCAGGTGTGC TGCATTGCTT TACCGAAAAT
TGGGAAATGG CCAAGGCGGC GATGGATTTA AATTATTATA TTTCTATCTC TGGAATCGTG
ACTTTTCGCA ATGCCGAGTC GCTGCGCGAT GTAGTTAAAA AAATGCCATT AGATCGGTTG
CTAGTAGAAA CCGACTCACC TTACTTAGCG CCTGTACCAT TTCGCGGTAA ACCGAACGAG
CCGCGTTATG TAAGAGAGGT CGCGCAATTT GTTGCCGATT TAAAAGGCAT TAGTTTGGAG
TCGTTAGCAG AAATCACCAC AAATAATTTT CATACCTTAT TTAAAAGAAC AAAATAA
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| Protein sequence | MLVDSHCHLD RLDLSRYEDG LDGAIAAAKE QGVKTMLCVC ISEENKQQVV DIASKYEGLF
CSVGTHPSDV TSEVVSVETL VEWAKAPKVV ALGESGLDYY YSKDYADIQK QSFANHLIAG
AQLDLPVIVH TRDARQDTLD LIKEYGSTES AGVLHCFTEN WEMAKAAMDL NYYISISGIV
TFRNAESLRD VVKKMPLDRL LVETDSPYLA PVPFRGKPNE PRYVREVAQF VADLKGISLE
SLAEITTNNF HTLFKRTK
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