| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1613 |
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| Symbol | |
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| ID | 3965720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2074704 |
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| End bp | 2075522 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920695 |
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| Product | glutamate racemase |
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| Protein accession | YP_527087 |
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| Protein GI | 90021260 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.572761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.655413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGAAT CACCCCGCCA GCCTGACCCC AACACACCTA CAGTGCTTGT ATTTGATTCT
GGCGCCGGAG GGCTAAGTAT CTGCACCAAA ATTATGGCGC TGCGCAACGA TTGCGCCATT
GTTTACGCAG CGGATAACGC TTACTTTCCG TACGGGGAAC TTTCAACCAG CGCGTTAAGG
CAGCGAGTTA TTACATTTAT GGGCGAGCTC ATCGATCAAT ACTCGCCCAG TATTGCCGTT
ATAGCCTGCA ATACTGCAAG CACAGCACTG CTTGCCGATC TTCGCGAAAC GTTTGATATC
CCGTTTGTAG GTGTTGTACC CGCAATTAAA CCGGCCGCTA CCGCCACACA AACCGGCACT
ATTGCCATTC TTGCGACCAG CGCTACAGTT ACACGCGATT ACACGCGCGA CTTAATCAAT
GAGTTTGCGC CTAATAAAAC CGTTATTTTG CACAGCGCTC AACCACTGGT AAGCGCAGCA
GAGCAGCTAA TACAAAACAA CCAATGCCCC AATTCCGCCA TACAAGGCGC CCTGAGCGAA
CTTTTCGCCA AACCCGGCGC AGAACATATA GACACAATAG TATTGGCTTG TACCCACTTC
CCACTGCTAC GTGAAGCCAT TCAAGCCCTG CTTCCCGCTT CCATCACGCT ACTGGACTCT
GGCGATGCCA TAGCTCGCAG AGTCGACTCC TTACTTTGCG CAACCAACAC CTTAAAGCAA
ACGCAGCGCA TTTCGGTACA TTTATCTAAG CCCTGCACCA CCACGCTAAA CGCATACAAT
AATTTTTTAG CCGCACACAT CCAAATCAAA CGCAGATAA
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| Protein sequence | MTESPRQPDP NTPTVLVFDS GAGGLSICTK IMALRNDCAI VYAADNAYFP YGELSTSALR
QRVITFMGEL IDQYSPSIAV IACNTASTAL LADLRETFDI PFVGVVPAIK PAATATQTGT
IAILATSATV TRDYTRDLIN EFAPNKTVIL HSAQPLVSAA EQLIQNNQCP NSAIQGALSE
LFAKPGAEHI DTIVLACTHF PLLREAIQAL LPASITLLDS GDAIARRVDS LLCATNTLKQ
TQRISVHLSK PCTTTLNAYN NFLAAHIQIK RR
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