| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1606 |
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| Symbol | fadA |
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| ID | 3965712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2064003 |
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| End bp | 2065178 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637920687 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_527080 |
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| Protein GI | 90021253 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00425712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTGC AACCTAGAGA TGTGGTGATT GTCGATTACG CTCGCACTCC CATGGGCCGT
TCTAAAAATG GCTGTTACAG AAATGTTCGC GCAGATGATT TAAGTGCAGA TCTTATTACT
GGTTTGCTCG CTCGCAATGC GGCGCTCGAC CCAGCTCAAA TTGACGATAT GATTTGGGGC
TGTGTAATGC AGCGCGGCGA GCAAGGGTTT AACGTTGCTC GCAATATTTT ACTGCGTGCA
GGTTTGCCCC ACACTGTACC GGCGCAAACC GTAAACCGCC TTTGCGGTTC TTCTATGTCT
GCATTGCACA CAGCGGCTGC CAATATTATG GCTGGGCTGG GCGATGTGTA CTTGGTGGGC
GGTGTTGAGC ACATGGGGCA TATCGATATG AACCAGCATG TCGATCCCAA CCCCGCACTC
GGTCATTCAG TAGCGCAAGC AGCTGGCTCT ATGGGGTTAA CGGCAGAGTA TCTTTCGTTG
CTGCACGGTA TTACCCGTGA AGCGATGGAT GAGTTTGGGG CGCGATCACA CAGAAAAGCG
GCTGAAGCCA CTGAGCAGGG TAAGTTCGCC AGAGAGATTA TCGCGCGCAT CGGCCACGAC
GAAACCGGTG CCCCTACGTT AATCAAGCAC GACGAGACAA TTCGGCCAGA TACTACCGTT
GAGGCTTTAT CTAAGCTCAA GCCTGCTTTT AACCCCAAGG GCGGAACGGT TACGGCCGGT
ACGTCATCGC AAATAACTGA TGGCGCCTCA TCCATGCTGG TTATGTCTGC GGCTAAGGCG
GCTGAGTTGG GTTTAACGCC TATAGCTAAA ATTCGCAGCA TGGCGCTGGC GGGGGTTGAT
CCTTCAATTA TGGGGTACGG CCCAGTGCCT GCCACGCAAA AGGCACTGGC AAACGCTGGC
TTATCTATTG AGGATATAGA TGTGGTAGAG CTTAACGAAG CCTTTGCTGC GCAGGCGTTA
CCCGTACTTA AAGACCTTAA CTTGCTGGAT GCTATGGAAG ACAAGGTGAA CTTATATGGT
GGTGCAATTG CGCTGGGGCA TCCATTTGGT TGCTCGGGTA CCCGTATTAC CGGTACGCTG
CTTTCAGTTA TGCAAGATAA AGACGCCACG CTAGGGGTGT CTACTATGTG TATAGGTTTA
GGGCAGGGTA TAACCACCAT TGTTGAGCGT GTTTAA
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| Protein sequence | MSLQPRDVVI VDYARTPMGR SKNGCYRNVR ADDLSADLIT GLLARNAALD PAQIDDMIWG
CVMQRGEQGF NVARNILLRA GLPHTVPAQT VNRLCGSSMS ALHTAAANIM AGLGDVYLVG
GVEHMGHIDM NQHVDPNPAL GHSVAQAAGS MGLTAEYLSL LHGITREAMD EFGARSHRKA
AEATEQGKFA REIIARIGHD ETGAPTLIKH DETIRPDTTV EALSKLKPAF NPKGGTVTAG
TSSQITDGAS SMLVMSAAKA AELGLTPIAK IRSMALAGVD PSIMGYGPVP ATQKALANAG
LSIEDIDVVE LNEAFAAQAL PVLKDLNLLD AMEDKVNLYG GAIALGHPFG CSGTRITGTL
LSVMQDKDAT LGVSTMCIGL GQGITTIVER V
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