| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1605 |
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| Symbol | fadB |
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| ID | 3965672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2061835 |
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| End bp | 2064000 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920686 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_527079 |
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| Protein GI | 90021252 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000436351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG AAGGTCAGGC AATACGGCTT ACACCGCTAG ATAATGGCTG TGTAGAGCTC
AACTTTGACT TGCAGGGTGA GTCGGTTAAT AAGTTTGGTC AAACTGTGTT TAAAGATCTT
GCCGAGGTGC TCGATCTCCT TGAATCCGCT AAAGATGTAA AAGGGGTGTT GGTTACTAGC
GCCAAGAGTG TGTTTTTTGT GGGCGCAGAC ATAAACGAAT TTGGCCCCAT CTTCGCCAAG
GGTGAAGAGG CCATTATCGA AGGGGTAAGC AGTGTTAATA AGCTGTTTAG CCGGTTCGAA
GACTTGCCAT TCCCTTCGGT AGTGGCAATT AATGGCTATG CCTTAGGCGG TGGTTTAGAG
TTTTGTTTGG CGTGCGATTA CCGTGTAATG AGCACTGCCG CTAAAATAGG CTTGCCCGAA
ACCAAGTTGG GTATTATTCC TGGTTGGGGT GGTACTGTGC GCTTGTCTCG TGTTGCGGGT
GTCGACGTGG CAGTGGAATG GATTGCCGGC GGCACCGAAA ACAGACCAGA TGCTGCATTA
AAAGCAGGCG TAGTAGATGG TATTGTAGAA CCTGAAAACC TGCGCGACGC CGCTTTAAAA
GTGCTTGCCG ATGCTGTTGC TGGTGATCTA GAAATTACTC AGCGCAGAGC TAAGAAAAAA
GGCCCCTTAA AACATAACGA TATTGAAAGC CTCCTCGCTT TTGAATCTTC CAAGGCCTTT
GTTAAAGCAA AAGCTGGTCG CAACTACCCA GCCCCAATCG CCGCAATTGA ATCTATGCAA
CATGGTGCCA AGCTAGGGCG CGATGAGGCT ATTCCTGTAG AGACTAAGCT GTTTGCGAAA
ATGGCGCTTA CTAGTGTGGC AGAATCGTTA ATAGGTTTAT TCCAAAGCGA TCAGCTATTA
GGTAAAAAAG CTAAAAATTG GGAAAAGCAA TCAGACAAAA AAGTAGAGCA TGCAGCCGTA
TTGGGCGCGG GCATTATGGG TGGTGGTATA GCTTATCAGT CTGCCTACCG TGGCGTGCCC
ATTAAAATGA AAGACATTGC CGCAGCGGGT GTGGAGCTGG GCTTAAAAGA AGCCACCAAG
CTTCTTGCGA AGCGCGTCGA TAGGGGGCGC ATGACCAACC TAGAAATGGG GCAAGTACTA
AGCCGCATTG ATGGAACTTT AAGCTACGAC AATTTTGACG ATGTAGATGT AGTGGTGGAA
GCTGTTGTTG AAAACCCAAA GGTGAAGCGC GCAGTTTTGG CTGAAGTGGA AGACAAAATA
AGCACCGATG CTATTTTGTG TTCAAACACT TCTACTATTT CTATCTCTTA TTTAGGTGAA
GCATTAAAGC GGCCAGAAAA TTTCTGCGGA ATGCACTTTT TTAACCCAGT GCACGCCATG
CCGTTAGTTG AAGTTATTCG CGGTGCTAAA ACCTCTGATA GAGCAATAGC AAGAACAGTG
GCCTATGCCA ATGCATTAGG TAAAAAAGCA ATTGTTGTTA ACGATTGCCC TGGCTTTTTA
GTCAACCGAG TATTGTTCCC TTATTTTGCT GGATTCGCGA TGTTGCTGCG CGATGGAGCA
GATTTTCAGC AAGTAGATAA AGTCATGGAG CGCTGGGGGT GGCCAATGGG CCCGGCTTAC
CTTATGGATG TTGTGGGTAT TGATACTGGT GTACATGCCG AATCCGTAAT GGCTGAGGGG
TTTCCAGATC GTATGGCAAA AACCTTTAAA GCTGCGTCTG ATATTTTGTT TGAATCTGGC
CGCTTAGGGC AGAAGAGCGA CTTAGGTTTT TACGCGTATA AAGAAGATAA AAAAGGTAAG
CCGCAAAAAG TAATGGCGGA AGACACTTAC GAGTTGCTTA AACCTCACTG CGCAGAACGC
AAAGAGTTTA GCGACGAGGA AATTATTGCG CGCATGATGG TGCCAATGGC AACTGAACTT
GCGCGCTGCT TGGAAGAGGG GGTTGTGAGC AGTGCCGCTG AAGCTGATAT GGCGCTTATT
TACGGCTTAG GTTTCCCTCC ATTCCGTGGT GGTGTATTCC GTTGGATAGA CAGCATTGGT
ATTCAAGCGT TTATCGATAT GGCTGCGCCG CTGGCCGATT TAGGGTTGGT TTACGTTCCA
ACTGATGGAA TGAAAGCCCT AGCCGCAAAA AATGCAAAAT ATTACAACCA GACCCAAGGA
GCCTAA
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| Protein sequence | MKFEGQAIRL TPLDNGCVEL NFDLQGESVN KFGQTVFKDL AEVLDLLESA KDVKGVLVTS
AKSVFFVGAD INEFGPIFAK GEEAIIEGVS SVNKLFSRFE DLPFPSVVAI NGYALGGGLE
FCLACDYRVM STAAKIGLPE TKLGIIPGWG GTVRLSRVAG VDVAVEWIAG GTENRPDAAL
KAGVVDGIVE PENLRDAALK VLADAVAGDL EITQRRAKKK GPLKHNDIES LLAFESSKAF
VKAKAGRNYP APIAAIESMQ HGAKLGRDEA IPVETKLFAK MALTSVAESL IGLFQSDQLL
GKKAKNWEKQ SDKKVEHAAV LGAGIMGGGI AYQSAYRGVP IKMKDIAAAG VELGLKEATK
LLAKRVDRGR MTNLEMGQVL SRIDGTLSYD NFDDVDVVVE AVVENPKVKR AVLAEVEDKI
STDAILCSNT STISISYLGE ALKRPENFCG MHFFNPVHAM PLVEVIRGAK TSDRAIARTV
AYANALGKKA IVVNDCPGFL VNRVLFPYFA GFAMLLRDGA DFQQVDKVME RWGWPMGPAY
LMDVVGIDTG VHAESVMAEG FPDRMAKTFK AASDILFESG RLGQKSDLGF YAYKEDKKGK
PQKVMAEDTY ELLKPHCAER KEFSDEEIIA RMMVPMATEL ARCLEEGVVS SAAEADMALI
YGLGFPPFRG GVFRWIDSIG IQAFIDMAAP LADLGLVYVP TDGMKALAAK NAKYYNQTQG
A
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